RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 IMMP2LQ96T52 175 aa14.35□□□□□ -0.11
SMARCA4-215ENST00000590574 RASL11BQ9BPW5 248 aa14.35□□□□□ -0.11
SMARCA4-215ENST00000590574 PPIHO43447 177 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-215ENST00000590574 TNFSF10P50591 281 aa14.35□□□□□ -0.11
SMARCA4-215ENST00000590574 GCSAMLQ5JQS6 135 aa14.35□□□□□ -0.11
SMARCA4-215ENST00000590574 HIST3H2BBQ8N257 126 aa14.35□□□□□ -0.11
SMARCA4-215ENST00000590574 BET1LQ9NYM9 111 aa14.35□□□□□ -0.11
SMARCA4-215ENST00000590574 A0A1W2PRD5 423 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 A0A1W2PRF3 423 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 A0A1W2PRM7 423 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 SOD3P08294 240 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 LY6G6EA0A0G2JKS1 128 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 AMY1AP04745 511 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 RPL11P62913 178 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 CYYR1Q96J86 154 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 DNAJC4Q9NNZ3 241 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 U3KQA8 63 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 FOXC1Q12948 553 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 SS18L1O75177 396 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 CD3EP07766 207 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 C9orf106Q8NAJ2 232 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 TMEM242Q9NWH2 141 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 CBY1Q9Y3M2 126 aa14.34□□□□□ -0.11
SMARCA4-215ENST00000590574 IGKV1-6A0A0C4DH72 117 aa14.33□□□□□ -0.11
SMARCA4-215ENST00000590574 IL18BPO95998 194 aa14.33□□□□□ -0.11
SMARCA4-215ENST00000590574 OR4A8P0C604 315 aa14.33□□□□□ -0.11
SMARCA4-215ENST00000590574 C1QTNF9P0C862 333 aa14.33□□□□□ -0.11
SMARCA4-215ENST00000590574 SFXN3Q9BWM7 321 aa14.33□□□□□ -0.11
SMARCA4-215ENST00000590574 ZNF430Q9H8G1 570 aaPredicted RBP14.33□□□□□ -0.11
SMARCA4-215ENST00000590574 IGHV3-48P01763 117 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 OR9G9P0C7N8 305 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 Q6ZRM9 215 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 TMEM170AQ8WVE7 144 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 PSPNO60542 156 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 IGLV3-1P01715 115 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 HLA-DQA1P01909 254 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 ANOS1P23352 680 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 SRIP30626 198 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 RPL30P62888 115 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 LYPD6Q86Y78 171 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 OR4C5Q8NGB2 326 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 ZNF785A8K8V0 405 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 HYPMO75409 117 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 RND2P52198 227 aa14.33□□□□□ -0.12
SMARCA4-215ENST00000590574 CACNA1EQ15878 2313 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 FAM157AC9JC47 383 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 IL15RAQ13261 267 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 SPATA45Q537H7 98 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 RPP25LQ8N5L8 163 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 C1orf162Q8NEQ5 155 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 WASHC3Q9Y3C0 194 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 SVILO95425 2214 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 ZDBF2Q9HCK1 2354 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 TRBV6-6A0A0A6YYG2 114 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 Q6P435 159 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 HIST1H2BLQ99880 126 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 IL36BQ9NZH7 164 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 C2orf16Q68DN1 1984 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 PGPEP1LA6NFU8 196 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 REG1AP05451 166 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 GNB2P62879 340 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 HIGD1AQ9Y241 93 aa14.32□□□□□ -0.12
SMARCA4-215ENST00000590574 SLC25A17O43808 307 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 TCF23Q7RTU1 214 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 TRBV24-1A0A075B6N3 115 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 NTF4P34130 210 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 CLEC3BP05452 202 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 MORN2Q502X0 79 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 MIR17HGQ75NE6 70 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 PRNTQ86SH4 94 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 DIRC2Q96SL1 478 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 PGPA6NDG6 321 aa14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 FOXI3A8MTJ6 420 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 RPL27AP46776 148 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 SSBP3Q9BWW4 388 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-215ENST00000590574 SELENOTP62341 195 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 LBHQ53QV2 105 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 SGK494Q96LW2 274 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 PTTG1IPP53801 180 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 NHLH1Q02575 133 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 FAM222BQ8WU58 562 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 TMEM191AQ9H0A3 160 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 TNFRSF19Q9NS68 423 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 KBTBD11-OT1A0A1B0GTJ5 212 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 GLRXP35754 106 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 ARL16Q0P5N6 197 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 FAM216BQ8N7L0 139 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 GSX1Q9H4S2 264 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 OR5AL1P0C617 328 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 OR4B1Q8NGF8 309 aa14.3□□□□□ -0.12
SMARCA4-215ENST00000590574 TRBV9A0A0B4J1U6 114 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 GNG7O60262 68 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 DUTP33316 252 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 TMEM14EPQ6UXP3 125 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 OR8B3Q8NGG8 313 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 OR8B2Q96RD0 313 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 C19orf24Q9BVV8 132 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 MAP1LC3CQ9BXW4 147 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 GATA2P23769 480 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 NPIPB3Q92617 1050 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms