RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 PDLIM4P50479 330 aa17.18■□□□□ 0.34
ZNF554-203ENST00000590116 LCN2P80188 198 aa17.18■□□□□ 0.34
ZNF554-203ENST00000590116 ITLN1Q8WWA0 313 aa17.18■□□□□ 0.34
ZNF554-203ENST00000590116 TTC28Q96AY4 2481 aa17.17■□□□□ 0.34
ZNF554-203ENST00000590116 SAA2-SAA4A0A096LPE2 208 aa17.17■□□□□ 0.34
ZNF554-203ENST00000590116 SAA2P0DJI9 122 aaPredicted RBP17.17■□□□□ 0.34
ZNF554-203ENST00000590116 CT45A1Q5HYN5 189 aa17.17■□□□□ 0.34
ZNF554-203ENST00000590116 CT45A3Q8NHU0 189 aa17.17■□□□□ 0.34
ZNF554-203ENST00000590116 FAM122AQ96E09 287 aa17.17■□□□□ 0.34
ZNF554-203ENST00000590116 DSCAML1Q8TD84 2053 aa17.17■□□□□ 0.34
ZNF554-203ENST00000590116 C15orf61A6NNL5 157 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 KIR2DS2P43631 304 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 ARSJQ5FYB0 599 aaPredicted RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 SFRP2Q96HF1 295 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 HINT2Q9BX68 163 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 NPVFQ9HCQ7 196 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 ASCL3Q9NQ33 180 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 YTHDF2Q9Y5A9 579 aaKnown RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 YLPM1P49750 1951 aaKnown RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 RAI1Q7Z5J4 1906 aaPredicted RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 A0A087X0M5 115 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 A0A1B0GX30 115 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 IL6RP08887 468 aaPredicted RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 KLF3P57682 345 aaPredicted RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 C17orf58Q2M2W7 97 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 OR4A47Q6IF82 309 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 TCF23Q7RTU1 214 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 FAM216AQ8WUB2 273 aa17.16■□□□□ 0.34
ZNF554-203ENST00000590116 SEPSECSQ9HD40 501 aaKnown RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 LSM4Q9Y4Z0 139 aaKnown RBP17.16■□□□□ 0.34
ZNF554-203ENST00000590116 GNG10P50151 68 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 DEFB108BQ8NET1 73 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 SGMS2Q8NHU3 365 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 ZNRD1Q9P1U0 126 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 TNCP24821 2201 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 TRGV8A0A0C4DH27 118 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 FOXH1O75593 365 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 THBS3P49746 956 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 RAB7AP51149 207 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 TMEM144Q7Z5S9 345 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 FAM169BQ8N8A8 192 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 SLC24A4Q8NFF2 622 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 CEP250Q9BV73 2442 aa17.15■□□□□ 0.34
ZNF554-203ENST00000590116 ZNF705GA8MUZ8 300 aaPredicted RBP17.14■□□□□ 0.34
ZNF554-203ENST00000590116 LHBP01229 141 aa17.14■□□□□ 0.34
ZNF554-203ENST00000590116 FTH1P19P0C7X4 201 aa17.14■□□□□ 0.34
ZNF554-203ENST00000590116 CGB3P0DN86 165 aa17.14■□□□□ 0.34
ZNF554-203ENST00000590116 CGB7P0DN87 165 aa17.14■□□□□ 0.34
ZNF554-203ENST00000590116 NPY1RP25929 384 aa17.14■□□□□ 0.34
ZNF554-203ENST00000590116 CNN1P51911 297 aaKnown RBP17.14■□□□□ 0.34
ZNF554-203ENST00000590116 STPG3Q8N7X2 389 aa17.14■□□□□ 0.34
ZNF554-203ENST00000590116 TRAPPC1Q9Y5R8 145 aa17.14■□□□□ 0.34
ZNF554-203ENST00000590116 MDFIC2A0A1B0GVS7 189 aa17.14■□□□□ 0.33
ZNF554-203ENST00000590116 RPL15P61313 204 aaKnown RBP17.14■□□□□ 0.33
ZNF554-203ENST00000590116 EFNB3Q15768 340 aa17.14■□□□□ 0.33
ZNF554-203ENST00000590116 TEPPQ6URK8 271 aa17.14■□□□□ 0.33
ZNF554-203ENST00000590116 LYG1Q8N1E2 194 aa17.14■□□□□ 0.33
ZNF554-203ENST00000590116 TANC2Q9HCD6 1990 aa17.14■□□□□ 0.33
ZNF554-203ENST00000590116 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
ZNF554-203ENST00000590116 SNRNP40Q96DI7 357 aaKnown RBP17.13■□□□□ 0.33
ZNF554-203ENST00000590116 TXNDC17Q9BRA2 123 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 OTOGLQ3ZCN5 2332 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 KBTBD11-OT1A0A1B0GTJ5 212 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 MBD3L4A6NDZ8 208 aaPredicted RBP17.13■□□□□ 0.33
ZNF554-203ENST00000590116 MBD3L3A6NE82 208 aaPredicted RBP17.13■□□□□ 0.33
ZNF554-203ENST00000590116 MBD3L5A6NJ08 208 aaPredicted RBP17.13■□□□□ 0.33
ZNF554-203ENST00000590116 CA2P00918 260 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 GCHFRP30047 84 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 FOXL1Q12952 345 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 MBD3L2Q8NHZ7 208 aaPredicted RBP17.13■□□□□ 0.33
ZNF554-203ENST00000590116 TMEM18Q96B42 140 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 ENY2Q9NPA8 101 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 TMEM14BQ9NUH8 114 aa17.13■□□□□ 0.33
ZNF554-203ENST00000590116 MAP1BP46821 2468 aaKnown RBP17.13■□□□□ 0.33
ZNF554-203ENST00000590116 HSPE1P61604 102 aaKnown RBP17.12■□□□□ 0.33
ZNF554-203ENST00000590116 REC114Q7Z4M0 266 aa17.12■□□□□ 0.33
ZNF554-203ENST00000590116 OCC1Q8TAD7 63 aa17.12■□□□□ 0.33
ZNF554-203ENST00000590116 FOXA2Q9Y261 457 aaPredicted RBP17.12■□□□□ 0.33
ZNF554-203ENST00000590116 ACTL6BO94805 426 aa17.12■□□□□ 0.33
ZNF554-203ENST00000590116 GLRXP35754 106 aa17.12■□□□□ 0.33
ZNF554-203ENST00000590116 MRPS11P82912 194 aaKnown RBP17.12■□□□□ 0.33
ZNF554-203ENST00000590116 MOB3BQ86TA1 216 aa17.12■□□□□ 0.33
ZNF554-203ENST00000590116 MRPL41Q8IXM3 137 aaKnown RBP17.12■□□□□ 0.33
ZNF554-203ENST00000590116 IMMP2LQ96T52 175 aa17.12■□□□□ 0.33
ZNF554-203ENST00000590116 IDI2-AS1Q9NZ38 188 aa17.12■□□□□ 0.33
ZNF554-203ENST00000590116 MMP23AO75900 390 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 IGFBP2P18065 325 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 RHOBP62745 196 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 PIP4P1Q86T03 277 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 ZNF664Q8N3J9 261 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 DCAF16Q9NXF7 216 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 ELOVL5Q9NYP7 299 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 TRGV10A0A0A0MS01 117 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 GCGP01275 180 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 TIMP3P35625 211 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 RPL31P62899 125 aaKnown RBP17.11■□□□□ 0.33
ZNF554-203ENST00000590116 TIMM23BQ5SRD1 257 aa17.11■□□□□ 0.33
ZNF554-203ENST00000590116 HLA-DRB5Q30154 266 aa17.1■□□□□ 0.33
ZNF554-203ENST00000590116 TEX38Q6PEX7 206 aa17.1■□□□□ 0.33
ZNF554-203ENST00000590116 TMEM256Q8N2U0 113 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms