RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 IAH1Q2TAA2 248 aaPredicted RBP6.12□□□□□ -1.43
SMAD4-209ENST00000589941 KRTAP27-1Q3LI81 207 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 ZNF718Q3SXZ3 478 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 GGNBP1Q5YKI7 109 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 Q6ZRG5 221 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 FAM219AQ8IW50 185 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 LRRC18Q8N456 261 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 LFNGQ8NES3 379 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 OR10AD1Q8NGE0 317 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 ABHD14BQ96IU4 210 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 SULT4A1Q9BR01 284 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 HRH4Q9H3N8 390 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 BANF2Q9H503 90 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 TMEM231Q9H6L2 316 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 AAMDCQ9H7C9 122 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 FAM212BQ9NTI7 297 aaPredicted RBP6.12□□□□□ -1.43
SMAD4-209ENST00000589941 TMEM38BQ9NVV0 291 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 EHFQ9NZC4 300 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 IL36GQ9NZH8 169 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 ZMAT5Q9UDW3 170 aaKnown RBP6.12□□□□□ -1.43
SMAD4-209ENST00000589941 NSG2Q9Y328 171 aa6.12□□□□□ -1.43
SMAD4-209ENST00000589941 VPS13DQ5THJ4 4388 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 K7N7A8 449 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 NPFFO15130 113 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 CRTAPO75718 401 aaPredicted RBP6.11□□□□□ -1.43
SMAD4-209ENST00000589941 IFNA21P01568 189 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 HCKP08631 526 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 MMP7P09237 267 aaPredicted RBP6.11□□□□□ -1.43
SMAD4-209ENST00000589941 OR8U9P0C7N5 309 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 ZNF44P15621 663 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 BLVRBP30043 206 aaPredicted RBP6.11□□□□□ -1.43
SMAD4-209ENST00000589941 GLP1RP43220 463 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 AKR1D1P51857 326 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 PPP1CBP62140 327 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 ARFRP1Q13795 201 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 SMCO1Q147U7 214 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 OR8B8Q15620 311 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 RSPO1Q2MKA7 263 aaPredicted RBP6.11□□□□□ -1.43
SMAD4-209ENST00000589941 FAM76BQ5HYJ3 339 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 DNLZQ5SXM8 178 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 TMEM42Q69YG0 159 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 C10orf99Q6UWK7 81 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 Q6ZS49 121 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 MOGAT3Q86VF5 341 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 SGPP2Q8IWX5 399 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 Q8N2B8 174 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 OR51T1Q8NGJ9 327 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 OR8U1Q8NH10 309 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 NABP1Q96AH0 204 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 SPSB1Q96BD6 273 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 CLCC1Q96S66 551 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 DCTN5Q9BTE1 182 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 NAA60Q9H7X0 242 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 METTL8Q9H825 291 aaKnown RBP6.11□□□□□ -1.43
SMAD4-209ENST00000589941 ANXA10Q9UJ72 324 aa6.11□□□□□ -1.43
SMAD4-209ENST00000589941 IGKV1D-8A0A087WSZ0 117 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 A0A087WWC5 75 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 BORCS7-ASMTA0A0B4J1R7 106 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 C7orf77A4D0Y5 90 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 C5orf49A4QMS7 147 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 CXorf65A6NEN9 183 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 FAM90A20PA6NIJ5 464 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 PCP4L1A6NKN8 68 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 RER1O15258 196 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 FARS2O95363 451 aaKnown RBP6.1□□□□□ -1.43
SMAD4-209ENST00000589941 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 HOXB5P09067 269 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 RAB5AP20339 215 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 MSR1P21757 451 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 ACKR3P25106 362 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 HTR5AP47898 357 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 RND3P61587 244 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 UBE2V2Q15819 145 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 GUK1Q16774 197 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 OR4D5Q8NGN0 318 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 AKR7LQ8NHP1 331 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 ERGIC1Q969X5 290 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 CYYR1Q96J86 154 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 POM121L2Q96KW2 1035 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 SPACA5Q96QH8 159 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 SSX3Q99909 188 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 NPFFR1Q9GZQ6 430 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 OR51M1Q9H341 326 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 WFDC1Q9HC57 220 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 OR2S2Q9NQN1 319 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 IL19Q9UHD0 177 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 HSPG2P98160 4391 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 DNAH11Q96DT5 4516 aa6.1□□□□□ -1.43
SMAD4-209ENST00000589941 DUXBA0A1W2PPF3 345 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 SDCBPO00560 298 aaPredicted RBP6.09□□□□□ -1.43
SMAD4-209ENST00000589941 CDS2O95674 445 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 QDPRP09417 244 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 OR8U8P0C7N1 319 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 OR5H8P0DN80 308 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 S100PP25815 95 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 CDAP32320 146 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 APLNRP35414 380 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 CSNK1A1P48729 337 aa6.09□□□□□ -1.43
SMAD4-209ENST00000589941 S100A10P60903 97 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms