RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PITX3O75364 302 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 CNIH1O95406 144 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 SCGB1D2O95969 90 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 IL15RAQ13261 267 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 TNXAQ16473 311 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 FOXRED2Q8IWF2 684 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 C5orf56Q8N8D9 126 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 FYTTD1Q96QD9 318 aaKnown RBP18■□□□□ 0.47
ACTN4-210ENST00000588618 RANGRFQ9HD47 186 aaPredicted RBP18■□□□□ 0.47
ACTN4-210ENST00000588618 OR51B2Q9Y5P1 312 aa18■□□□□ 0.47
ACTN4-210ENST00000588618 DNAJC9-AS1A6NH13 148 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 NXPH3O95157 252 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 CA2P00918 260 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 IFNA17P01571 189 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 FGF2P09038 288 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 MYOD1P15172 320 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 MAS1LP35410 378 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 SRSF4Q08170 494 aaKnown RBP17.99■□□□□ 0.47
ACTN4-210ENST00000588618 PJVKQ0ZLH3 352 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 ASB13Q8WXK3 278 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 QTRT1Q9BXR0 403 aaKnown RBP17.99■□□□□ 0.47
ACTN4-210ENST00000588618 NMES1Q9C002 83 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 FOXA2Q9Y261 457 aaPredicted RBP17.99■□□□□ 0.47
ACTN4-210ENST00000588618 NF1P21359 2839 aa17.99■□□□□ 0.47
ACTN4-210ENST00000588618 ZNF429Q86V71 674 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 OR4D5Q8NGN0 318 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 TMEM14BQ9NUH8 114 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 ST8SIA3O43173 380 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 CHST1O43916 411 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 OPN1MWP04001 364 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 OPN1MW2P0DN77 364 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 OPN1MW3P0DN78 364 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 NKX2-1P43699 371 aaPredicted RBP17.98■□□□□ 0.47
ACTN4-210ENST00000588618 OR5B3Q8NH48 314 aa17.98■□□□□ 0.47
ACTN4-210ENST00000588618 WRBO00258 174 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 FCN1O00602 326 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 HLA-DRB1P01911 266 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 GIPP09681 153 aaPredicted RBP17.97■□□□□ 0.47
ACTN4-210ENST00000588618 SSBP2P81877 361 aaPredicted RBP17.97■□□□□ 0.47
ACTN4-210ENST00000588618 Q5BKY6 102 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 CXorf66Q5JRM2 361 aaPredicted RBP17.97■□□□□ 0.47
ACTN4-210ENST00000588618 C9orf152Q5JTZ5 239 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 AKAP14Q86UN6 197 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 HINT2Q9BX68 163 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 ZNF257Q9Y2Q1 563 aa17.97■□□□□ 0.47
ACTN4-210ENST00000588618 G3V3Q6 166 aa17.96■□□□□ 0.47
ACTN4-210ENST00000588618 CCNKO75909 580 aa17.96■□□□□ 0.47
ACTN4-210ENST00000588618 HILS1P60008 231 aa17.96■□□□□ 0.47
ACTN4-210ENST00000588618 ZNF562Q6V9R5 426 aa17.96■□□□□ 0.47
ACTN4-210ENST00000588618 OR1L8Q8NGR8 309 aa17.96■□□□□ 0.47
ACTN4-210ENST00000588618 ABHD5Q8WTS1 349 aa17.96■□□□□ 0.47
ACTN4-210ENST00000588618 ZFP57Q9NU63 452 aa17.96■□□□□ 0.47
ACTN4-210ENST00000588618 FAM90A26D6RGX4 464 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 SMLR1H3BR10 107 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 CLDN34H7C241 214 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 COMPP49747 757 aaPredicted RBP17.95■□□□□ 0.46
ACTN4-210ENST00000588618 S100A10P60903 97 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 SPCS3P61009 180 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 HSPE1P61604 102 aaKnown RBP17.95■□□□□ 0.46
ACTN4-210ENST00000588618 LRRC37A5PQ49AS3 106 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 AARDQ4LEZ3 155 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 NPFFR1Q9GZQ6 430 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 GPR137BO60478 399 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 MED6O75586 246 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 AMY1AP04745 511 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 RPL27AP46776 148 aaKnown RBP17.95■□□□□ 0.46
ACTN4-210ENST00000588618 RAP2BP61225 183 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 TNFRSF9Q07011 255 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 FXYD3Q14802 87 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 C10orf55Q5SWW7 151 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 OR52E5Q8NH55 327 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 ENY2Q9NPA8 101 aa17.95■□□□□ 0.46
ACTN4-210ENST00000588618 TEX50A0A1B0GTY4 177 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 SH2D7A6NKC9 451 aaPredicted RBP17.94■□□□□ 0.46
ACTN4-210ENST00000588618 CEBPZOSA8MTT3 80 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 TRIM77I1YAP6 450 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 TCF21O43680 179 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 MBPP02686 304 aaPredicted RBP17.94■□□□□ 0.46
ACTN4-210ENST00000588618 CX3CL1P78423 397 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 C11orf87Q6NUJ2 197 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 GRPEL2Q8TAA5 225 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 PPP1R1CQ8WVI7 109 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 SRSF12Q8WXF0 261 aaKnown RBP17.94■□□□□ 0.46
ACTN4-210ENST00000588618 ARPC1AQ92747 370 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 ESM1Q9NQ30 184 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 HSPB7Q9UBY9 170 aa17.94■□□□□ 0.46
ACTN4-210ENST00000588618 LSM5Q9Y4Y9 91 aaKnown RBP17.94■□□□□ 0.46
ACTN4-210ENST00000588618 E7EUB6 86 aa17.93■□□□□ 0.46
ACTN4-210ENST00000588618 PET100P0DJ07 73 aa17.93■□□□□ 0.46
ACTN4-210ENST00000588618 HOXA1P49639 335 aaPredicted RBP17.93■□□□□ 0.46
ACTN4-210ENST00000588618 RAB32Q13637 225 aa17.93■□□□□ 0.46
ACTN4-210ENST00000588618 MAGT1Q9H0U3 335 aa17.93■□□□□ 0.46
ACTN4-210ENST00000588618 PLEKHA3Q9HB20 300 aa17.93■□□□□ 0.46
ACTN4-210ENST00000588618 IGHV7-81A0A0B4J1V7 117 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 PFDN1O60925 122 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 RLN2P04090 185 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 BLCAPP62952 87 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 ID3Q02535 119 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 FGL1Q08830 312 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 SPINK9Q5DT21 86 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms