RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ZNF257Q9Y2Q1 563 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 TEX15Q9BXT5 2789 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 KANTRA0A1W2PQU2 76 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 CD24P25063 80 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 EWSR1Q01844 656 aaKnown RBP eCLIP20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 EBI3Q14213 229 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 CLEC9AQ6UXN8 241 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 BRD3OSQ6XYD6 125 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 ARPC5LQ9BPX5 153 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 PSENENQ9NZ42 101 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 OR51B2Q9Y5P1 312 aa20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 FLNAP21333 2647 aaKnown RBP20.86■□□□□ 0.93
SCAMP4-210ENST00000588555 CEBPZOSA8MTT3 80 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 MOSP00540 346 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 SNRNP70P08621 437 aaKnown RBP20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 RPL8P62917 257 aaKnown RBP20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 NHLH2Q02577 135 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 EAF1Q96JC9 268 aaPredicted RBP20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 ZNF430Q9H8G1 570 aaPredicted RBP20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 ZC4H2Q9NQZ6 224 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 NUP50Q9UKX7 468 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 FGF2P09038 288 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 SLC25A31Q9H0C2 315 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 CYTL1Q9NRR1 136 aa20.85■□□□□ 0.93
SCAMP4-210ENST00000588555 VDAC2P45880 294 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-210ENST00000588555 Q8N6K4 173 aa20.84■□□□□ 0.93
SCAMP4-210ENST00000588555 CIB3Q96Q77 187 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-210ENST00000588555 FKBP11Q9NYL4 201 aa20.84■□□□□ 0.93
SCAMP4-210ENST00000588555 FBXL17Q9UF56 701 aa20.84■□□□□ 0.93
SCAMP4-210ENST00000588555 SIGLEC9Q9Y336 463 aa20.84■□□□□ 0.93
SCAMP4-210ENST00000588555 TEX50A0A1B0GTY4 177 aa20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 SPDEFO95238 335 aa20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 PJVKQ0ZLH3 352 aa20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 SLC51BQ86UW2 128 aa20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 THNSL2Q86YJ6 484 aa20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 CIARTQ8N365 385 aaPredicted RBP20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 OR2T10Q8NGZ9 312 aa20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 OR5B3Q8NH48 314 aa20.83■□□□□ 0.93
SCAMP4-210ENST00000588555 RGS13O14921 159 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 F2RL1P55085 397 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 HNF4GQ14541 408 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 ABCA1O95477 2261 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 PRCDQ00LT1 54 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 BAXQ07812 192 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 TEX261Q6UWH6 196 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 TMEM14EPQ6UXP3 125 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 NPBQ8NG41 125 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 OR4C12Q96R67 309 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 METTL1Q9UBP6 276 aaKnown RBP20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 U3KQ87 197 aa20.82■□□□□ 0.92
SCAMP4-210ENST00000588555 A0A0U1RQK1 487 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 TAAR5O14804 337 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 CST7O76096 145 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 NDUFA3O95167 84 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 CFDP00746 253 aaPredicted RBP20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 HES1Q14469 280 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 MMDQ15546 238 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 PRSS8Q16651 343 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 SPANXN5Q5MJ07 72 aa20.81■□□□□ 0.92
SCAMP4-210ENST00000588555 RRHO14718 337 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 LY86O95711 162 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 OPN1MWP04001 364 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 OPN1MW2P0DN77 364 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 OPN1MW3P0DN78 364 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 SULT1A1P50225 295 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 TMEM267Q0VDI3 215 aaPredicted RBP20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 FAM120AOSQ5T036 256 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 ZNF471Q9BX82 626 aaPredicted RBP20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 SMIM3Q9BZL3 60 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 COMMD5Q9GZQ3 224 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 FBXL15Q9H469 300 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 CSPG4Q6UVK1 2322 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 NBR2O15453 112 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 BRS3P32247 399 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 CYB5R2Q6BCY4 276 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 PPP1R27Q86WC6 154 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 MMD2Q8IY49 270 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 OR8H1Q8NGG4 311 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 MEGF9Q9H1U4 602 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 NDUFA4L2Q9NRX3 87 aa20.8■□□□□ 0.92
SCAMP4-210ENST00000588555 CGB1A6NKQ9 187 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 E7EUB6 86 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 METTL15P1P0C7V9 234 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 HOXA1P49639 335 aaPredicted RBP20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 C10orf55Q5SWW7 151 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 HAPLN4Q86UW8 402 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 STX12Q86Y82 276 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 OR1L8Q8NGR8 309 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 WFDC1Q9HC57 220 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 PLXNB1O43157 2135 aa20.79■□□□□ 0.92
SCAMP4-210ENST00000588555 ZNF680Q8NEM1 530 aa20.78■□□□□ 0.92
SCAMP4-210ENST00000588555 STOML3Q8TAV4 291 aa20.78■□□□□ 0.92
SCAMP4-210ENST00000588555 ST8SIA2Q92186 375 aa20.78■□□□□ 0.92
SCAMP4-210ENST00000588555 HEYLQ9NQ87 328 aaPredicted RBP20.78■□□□□ 0.92
SCAMP4-210ENST00000588555 STRAPQ9Y3F4 350 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-210ENST00000588555 SOX21Q9Y651 276 aaPredicted RBP20.78■□□□□ 0.92
SCAMP4-210ENST00000588555 A0A1B0GW64 132 aa20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 FAM106CPP0CH98 169 aa20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 SSBP2P81877 361 aaPredicted RBP20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 ARL16Q0P5N6 197 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms