RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 KIAA2026Q5HYC2 2103 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 HIST3H2BBQ8N257 126 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 OR2T10Q8NGZ9 312 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 RFESDQ8TAC1 157 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 FAM222BQ8WU58 562 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 OPN3Q9H1Y3 402 aaPredicted RBP11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 GFOD1Q9NXC2 390 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 CALYQ9NYX4 217 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 RNF7Q9UBF6 113 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 DUSP13Q9UII6 198 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 PRNDQ9UKY0 176 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 SETD2Q9BYW2 2564 aaPredicted RBP11.63□□□□□ -0.55
NEDD4L-223ENST00000588516 IGKV1D-17A0A075B6S4 117 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 TRAV9-1A0A075B6T8 112 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IGHV3-43A0A0B4J1X8 118 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IGHV3-64DA0A0J9YX35 117 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 ZNF729A6NN14 1252 aaPredicted RBP11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 PAGE4O60829 102 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 LHBP01229 141 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IGKV1D-33P01593 117 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IGKV1-33P01594 117 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 TYMSP04818 313 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 CD55P08174 381 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IGHV3-43DP0DP04 118 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IRF2P14316 349 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 VDAC2P45880 294 aaPredicted RBP11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 RHOBP62745 196 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 TFF3Q07654 80 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 KRTAP21-3Q3LHN1 58 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 KRTCAP3Q53RY4 240 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 C1orf185Q5T7R7 199 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 OR51G1Q8NGK1 321 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 SDSLQ96GA7 329 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 C19orf24Q9BVV8 132 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 CRYBG3Q68DQ2 2970 aa11.62□□□□□ -0.55
NEDD4L-223ENST00000588516 IGLV3-9A0A075B6K5 115 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 KBTBD11-OT1A0A1B0GTJ5 212 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 VSTM5A8MXK1 200 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 M0R1B8 84 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 GGCTO75223 188 aaKnown RBP11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 HSPE1P61604 102 aaKnown RBP11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 RTL8BQ17RB0 113 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 COA6Q5JTJ3 125 aaKnown RBP11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 TMEM183AQ8IXX5 376 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 FRZBQ92765 325 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 UHRF2Q96PU4 802 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 OR2V2Q96R30 315 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 TMEM140Q9NV12 185 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 ZNF257Q9Y2Q1 563 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 HIVEP3Q5T1R4 2406 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 CSMD1Q96PZ7 3565 aa11.61□□□□□ -0.55
NEDD4L-223ENST00000588516 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 DVL1O14640 695 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 CGB3P0DN86 165 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 CGB7P0DN87 165 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 ZNF83P51522 516 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 EDDM3BP56851 147 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 LOXL3P58215 753 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 RELBQ01201 579 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 TEPPQ6URK8 271 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 MOGAT3Q86VF5 341 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 OR10D4PQ8NGN7 298 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 Q8TCH9 128 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 LINC00574Q9H8X3 128 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 FZR1Q9UM11 496 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 TCF19Q9Y242 345 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 LY96Q9Y6Y9 160 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 NKX6-3A6NJ46 265 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 STAG3L2P0CL84 134 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 STAG3L3P0CL85 134 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 CCKARP32238 428 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 MRPS11P82912 194 aaKnown RBP11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 FOXL1Q12952 345 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 TREML4Q6UXN2 200 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 TPRX1Q8N7U7 411 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 OR5R1Q8NH85 324 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 RNASEH2CQ8TDP1 164 aaKnown RBP11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 ABHD5Q8WTS1 349 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 TMEM170AQ8WVE7 144 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 DDB2Q92466 427 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 IDI2-AS1Q9NZ38 188 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 PXMP4Q9Y6I8 212 aa11.6□□□□□ -0.55
NEDD4L-223ENST00000588516 CHD3Q12873 2000 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-223ENST00000588516 MDFIC2A0A1B0GVS7 189 aa11.59□□□□□ -0.55
NEDD4L-223ENST00000588516 hADV38S2A0JD32 116 aa11.59□□□□□ -0.55
NEDD4L-223ENST00000588516 A8MXE2 369 aa11.59□□□□□ -0.55
NEDD4L-223ENST00000588516 HIST1H1BP16401 226 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-223ENST00000588516 EGR1P18146 543 aa11.59□□□□□ -0.55
NEDD4L-223ENST00000588516 TNFRSF1AP19438 455 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms