RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 A6NJ64 397 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 TPPPO94811 219 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 RBMY1DP0C7P1 496 aaKnown RBP10.81□□□□□ -0.68
VMP1-206ENST00000587945 DEFA4P12838 97 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 RPA2P15927 270 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 ARL3P36405 182 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 OR2B8PP59922 312 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 MSMO1Q15800 293 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 LINC00322Q6ZN03 302 aaPredicted RBP10.81□□□□□ -0.68
VMP1-206ENST00000587945 ZNF818PQ6ZRF7 136 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 TMEM17Q86X19 198 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 ZBTB34Q8NCN2 500 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 OR51H1Q8NH63 302 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 WDR89Q96FK6 387 aaPredicted RBP10.81□□□□□ -0.68
VMP1-206ENST00000587945 FAM110AQ9BQ89 295 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 SLC2A8Q9NY64 477 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 CEPT1Q9Y6K0 416 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 IGLV11-55A0A075B6I3 123 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 ZNF320A2RRD8 509 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 LGALS9O00182 355 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 UPK2O00526 184 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 DHFRP00374 187 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 IFNA6P05013 189 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 CBLN1P23435 193 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 FAM209BQ5JX69 171 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 OR5AP2Q8NGF4 316 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 OR4A5Q8NH83 315 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 GIMAP1Q8WWP7 306 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 EEF1AKMT3Q96AZ1 226 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 HIPK2Q9H2X6 1198 aa10.8□□□□□ -0.68
VMP1-206ENST00000587945 CSMD3Q7Z407 3707 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 LCE6AA0A183 80 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 IGLC7A0M8Q6 106 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 TMEM213A2RRL7 107 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 OR11H12B2RN74 326 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 RBFOX2O43251 390 aaKnown RBP eCLIP10.79□□□□□ -0.68
VMP1-206ENST00000587945 S1PR2O95136 353 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 HPRT1P00492 218 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 CLEC3BP05452 202 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 CBX5P45973 191 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 TAS2R31P59538 309 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 CATR1Q13166 79 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 KLK9Q2XQG4 91 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 KCTD21Q4G0X4 260 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 AADACL3Q5VUY0 350 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 LAX1Q8IWV1 398 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 OR10W1Q8NGF6 305 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 AIFM2Q9BRQ8 373 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 SRD5A3Q9H8P0 318 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 IFT46Q9NQC8 304 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 TMEM140Q9NV12 185 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 TECRQ9NZ01 308 aaKnown RBP10.79□□□□□ -0.68
VMP1-206ENST00000587945 EHFQ9NZC4 300 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 MLXQ9UH92 298 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 KLK9Q9UKQ9 250 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 LYSTQ99698 3801 aa10.79□□□□□ -0.68
VMP1-206ENST00000587945 IGHV3-35A0A0C4DH35 117 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 XRCC3O43542 346 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 NQO2P16083 231 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 HIST1H1BP16401 226 aaKnown RBP10.78□□□□□ -0.68
VMP1-206ENST00000587945 GNRHRP30968 328 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 RPS19P39019 145 aaKnown RBP10.78□□□□□ -0.68
VMP1-206ENST00000587945 RFX2P48378 723 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 HERV-K104P61576 105 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 LSM3P62310 102 aaKnown RBP10.78□□□□□ -0.68
VMP1-206ENST00000587945 POU2AF1Q16633 256 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 FAM106AQ4KMX7 169 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 UNQ9165/PRO28630Q6UXU0 137 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 TMEM61Q8N0U2 210 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 UXS1Q8NBZ7 420 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 COMMD5Q9GZQ3 224 aa10.78□□□□□ -0.68
VMP1-206ENST00000587945 SCAF4O95104 1147 aaKnown RBP10.77□□□□□ -0.69
VMP1-206ENST00000587945 PMP2P02689 132 aa10.77□□□□□ -0.69
VMP1-206ENST00000587945 GPR183P32249 361 aa10.77□□□□□ -0.69
VMP1-206ENST00000587945 ZNF57Q68EA5 555 aaPredicted RBP10.77□□□□□ -0.69
VMP1-206ENST00000587945 S100A16Q96FQ6 103 aaKnown RBP10.77□□□□□ -0.69
VMP1-206ENST00000587945 ZNF2Q9BSG1 426 aaPredicted RBP10.77□□□□□ -0.69
VMP1-206ENST00000587945 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.69
VMP1-206ENST00000587945 TRBV7-1A0A0A6YYK4 115 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 RLN1P04808 185 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 TAS2R20P59543 309 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 UBE2NLQ5JXB2 153 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 DHRS11Q6UWP2 260 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 BTNL8Q6UX41 500 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 SAMD12Q8N8I0 201 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 ZNF502Q8TBZ5 544 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 CD300LFQ8TDQ1 290 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 MOB3AQ96BX8 217 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 YIPF6Q96EC8 236 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 CXorf58Q96LI9 332 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 QTRT1Q9BXR0 403 aaKnown RBP10.76□□□□□ -0.69
VMP1-206ENST00000587945 ANAPC10Q9UM13 185 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 NSG2Q9Y328 171 aa10.76□□□□□ -0.69
VMP1-206ENST00000587945 IGHV3-21A0A0B4J1V1 117 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 TEX50A0A1B0GTY4 177 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 A8MWP6 167 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms