RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 FAM209BQ5JX69 171 aa15.89■□□□□ 0.13
CIRBP-209ENST00000586555 ZNF343Q6P1L6 599 aa15.89■□□□□ 0.13
CIRBP-209ENST00000586555 NECAP1Q8NC96 275 aa15.89■□□□□ 0.13
CIRBP-209ENST00000586555 ISOC1Q96CN7 298 aa15.89■□□□□ 0.13
CIRBP-209ENST00000586555 ELOVL1Q9BW60 279 aa15.89■□□□□ 0.13
CIRBP-209ENST00000586555 FAM212BQ9NTI7 297 aaPredicted RBP15.89■□□□□ 0.13
CIRBP-209ENST00000586555 TMEM140Q9NV12 185 aa15.89■□□□□ 0.13
CIRBP-209ENST00000586555 PEF1Q9UBV8 284 aaKnown RBP15.89■□□□□ 0.13
CIRBP-209ENST00000586555 HMX3A6NHT5 357 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 NPIPB5A8MRT5 1133 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 H3BMQ9 156 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 UPK2O00526 184 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 SAP30O75446 220 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 CD3DP04234 171 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 IL18Q14116 193 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 PHLDA2Q53GA4 152 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 TMEM229BQ8NBD8 167 aa15.88■□□□□ 0.13
CIRBP-209ENST00000586555 C6orf62Q9GZU0 229 aaPredicted RBP15.88■□□□□ 0.13
CIRBP-209ENST00000586555 TRBV9A0A0B4J1U6 114 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 CCDC160A6NGH7 325 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 MARCH11A6NNE9 402 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 TEX22C9J3V5 150 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 IL6RP08887 468 aaPredicted RBP15.87■□□□□ 0.13
CIRBP-209ENST00000586555 PGAM2P15259 253 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 ECI1P42126 302 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 ZNF486Q96H40 463 aaPredicted RBP15.87■□□□□ 0.13
CIRBP-209ENST00000586555 OR4C12Q96R67 309 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 SRSF8Q9BRL6 282 aaKnown RBP15.87■□□□□ 0.13
CIRBP-209ENST00000586555 AKIP1Q9NQ31 210 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 NBEAL2Q6ZNJ1 2754 aa15.87■□□□□ 0.13
CIRBP-209ENST00000586555 SNAPC5O75971 98 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 RAB3DO95716 219 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 KRASP01116 189 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 PRH1P02810 166 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 DEFA4P12838 97 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 HIST1H1BP16401 226 aaKnown RBP15.86■□□□□ 0.13
CIRBP-209ENST00000586555 THOC7Q6I9Y2 204 aaKnown RBP15.86■□□□□ 0.13
CIRBP-209ENST00000586555 ACSM6Q6P461 480 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 TBC1D26Q86UD7 250 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 CADM3Q8N126 398 aa15.86■□□□□ 0.13
CIRBP-209ENST00000586555 TENM3Q9P273 2699 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 CTDSPLO15194 276 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 CYB5BO43169 146 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 CRYGCP07315 174 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 PSMB6P28072 239 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 MEF2DQ14814 521 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 C11orf87Q6NUJ2 197 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 STEAP1BQ6NZ63 245 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 HSD17B13Q7Z5P4 300 aaPredicted RBP15.85■□□□□ 0.13
CIRBP-209ENST00000586555 ZFAND1Q8TCF1 268 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 TSC22D3Q99576 134 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 FKBP11Q9NYL4 201 aa15.85■□□□□ 0.13
CIRBP-209ENST00000586555 RSL24D1Q9UHA3 163 aaKnown RBP15.85■□□□□ 0.13
CIRBP-209ENST00000586555 TNCP24821 2201 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 E7EUB6 86 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 CD74P04233 296 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 RPA2P15927 270 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 OR2B8PP59922 312 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 DEFA5Q01523 94 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 ZNF45Q02386 682 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 EXOSC2Q13868 293 aaKnown RBP15.84■□□□□ 0.13
CIRBP-209ENST00000586555 RPEL1Q2QD12 228 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 ZNF585BQ52M93 769 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 OR6Q1Q8NGQ2 317 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 TERB2Q8NHR7 220 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 MCFD2Q8NI22 146 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 SMIM4Q8WVI0 70 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 B9D2Q9BPU9 175 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 QTRT1Q9BXR0 403 aaKnown RBP15.84■□□□□ 0.13
CIRBP-209ENST00000586555 SLIRPQ9GZT3 109 aaKnown RBP15.84■□□□□ 0.13
CIRBP-209ENST00000586555 FBXL7Q9UJT9 491 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 ZNF256Q9Y2P7 627 aaPredicted RBP15.84■□□□□ 0.13
CIRBP-209ENST00000586555 CEPT1Q9Y6K0 416 aa15.84■□□□□ 0.13
CIRBP-209ENST00000586555 TRAV3A0A0B4J244 114 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 OR2J3O76001 311 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 SERPINE2P07093 398 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 TRAPPC2P0DI81 140 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 TRAPPC2BP0DI82 140 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 AREGP15514 252 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 G6PCP35575 357 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 KLF5Q13887 457 aaPredicted RBP15.83■□□□□ 0.12
CIRBP-209ENST00000586555 C15orf32Q32M92 178 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 SCGB2B2Q4G0G5 96 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 LHFPL1Q86WI0 220 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 OR1L8Q8NGR8 309 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 THYN1Q9P016 225 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 PRNDQ9UKY0 176 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 SORL1Q92673 2214 aa15.83■□□□□ 0.12
CIRBP-209ENST00000586555 RYR3Q15413 4870 aa15.82■□□□□ 0.12
CIRBP-209ENST00000586555 DISC1C4P0D8 188 aa15.82■□□□□ 0.12
CIRBP-209ENST00000586555 LY86O95711 162 aa15.82■□□□□ 0.12
CIRBP-209ENST00000586555 CTRB1P17538 263 aa15.82■□□□□ 0.12
CIRBP-209ENST00000586555 PTBP1P26599 531 aaKnown RBP eCLIP15.82■□□□□ 0.12
CIRBP-209ENST00000586555 RND3P61587 244 aa15.82■□□□□ 0.12
CIRBP-209ENST00000586555 CTRB2Q6GPI1 263 aa15.82■□□□□ 0.12
CIRBP-209ENST00000586555 CCDC71LQ8N9Z2 235 aa15.82■□□□□ 0.12
CIRBP-209ENST00000586555 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.81■□□□□ 0.12
CIRBP-209ENST00000586555 TEX50A0A1B0GTY4 177 aa15.81■□□□□ 0.12
CIRBP-209ENST00000586555 A0A1B0GW64 132 aa15.81■□□□□ 0.12
CIRBP-209ENST00000586555 FABP12A6NFH5 140 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms