RNA–Protein interactions for RNA: ENST00000586190.1

CACNA1A-207, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-207ENST00000586190 CCL28Q9NRJ3 127 aa13.84□□□□□ -0.19
CACNA1A-207ENST00000586190 TRAV18A0A075B6X5 111 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 CGB1A6NKQ9 187 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 SSX9Q7RTT3 188 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 SPAG16Q8N0X2 631 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 GVQW1Q8N7I0 195 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 OR5H6Q8NGV6 325 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 GIMAP1Q8WWP7 306 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 CXorf58Q96LI9 332 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 GPHA2Q96T91 129 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 SRD5A3Q9H8P0 318 aa13.83□□□□□ -0.2
CACNA1A-207ENST00000586190 TMEM213A2RRL7 107 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 HPRT1P00492 218 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 EDN2P20800 178 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 CBX5P45973 191 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 OR2B8PP59922 312 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 CATR1Q13166 79 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 GUCA2BQ16661 112 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 ZNF57Q68EA5 555 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 ZNF773Q6PK81 442 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 SLC16A13Q7RTY0 426 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 WDR89Q96FK6 387 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 AUNIPQ9H7T9 357 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 RETNQ9HD89 108 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 DIABLOQ9NR28 239 aa13.82□□□□□ -0.2
CACNA1A-207ENST00000586190 TNFSF12O43508 249 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 ATP6V1G2O95670 118 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 IGHV3-23P01764 117 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 CLEC2LP0C7M8 214 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 DEFA4P12838 97 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 NQO2P16083 231 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 MXD1Q05195 221 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 IDNKQ5T6J7 187 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 CD300LFQ8TDQ1 290 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 MARC2Q969Z3 335 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 SLC5A7Q9GZV3 580 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 PLEKHA2Q9HB19 425 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 HRASLSQ9HDD0 168 aa13.81□□□□□ -0.2
CACNA1A-207ENST00000586190 IGLC7A0M8Q6 106 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 UPK2O00526 184 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 CLEC3BP05452 202 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 C8orf88P0DMB2 117 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 PTHLHP12272 177 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 MYOD1P15172 320 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 THOC7Q6I9Y2 204 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 TMEM61Q8N0U2 210 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 OR5AP2Q8NGF4 316 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 ZNF502Q8TBZ5 544 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 BORCS5Q969J3 196 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 RNF167Q9H6Y7 350 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 MLXQ9UH92 298 aa13.8□□□□□ -0.2
CACNA1A-207ENST00000586190 TRAV25A0A0B4J276 109 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 ZNF320A2RRD8 509 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 MFSD2BA6NFX1 497 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 SULT1C2O00338 296 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 PTBP1P26599 531 aaKnown RBP eCLIP13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 ELLP55199 621 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 ANKRD55Q3KP44 614 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 ZNF818PQ6ZRF7 136 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 UXS1Q8NBZ7 420 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 CACNG8Q8WXS5 425 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 FAM110AQ9BQ89 295 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 COMMD5Q9GZQ3 224 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 THYN1Q9P016 225 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 S4R3C0 116 aa13.79□□□□□ -0.2
CACNA1A-207ENST00000586190 EPPK1P58107 5090 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 LOC100506127A0A0U1RQW1 187 aa13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 REG1AP05451 166 aa13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 HSD17B13Q7Z5P4 300 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 CADM3Q8N126 398 aa13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 COMMD9Q9P000 198 aa13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 MRPL27Q9P0M9 148 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-207ENST00000586190 TRAV3A0A0B4J244 114 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 XRCC3O43542 346 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 JTBO76095 146 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 FXYD4P59646 89 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 DHRS11Q6UWP2 260 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 CROCCP3Q8IVE0 287 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 OR52B4Q8NGK2 314 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 VN1R17PQ8TDU5 208 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 ATP6V0BQ99437 205 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 ZNF436Q9C0F3 470 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 TMEM140Q9NV12 185 aa13.77□□□□□ -0.21
CACNA1A-207ENST00000586190 PLECQ15149 4684 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 CYB5BO43169 146 aa13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 GNRHRP30968 328 aa13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 TM4SF20Q53R12 229 aa13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 UNQ9165/PRO28630Q6UXU0 137 aa13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 DMBX1Q8NFW5 382 aa13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 ANAPC10Q9UM13 185 aa13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 UFC1Q9Y3C8 167 aa13.76□□□□□ -0.21
CACNA1A-207ENST00000586190 S1PR2O95136 353 aa13.75□□□□□ -0.21
CACNA1A-207ENST00000586190 GPR183P32249 361 aa13.75□□□□□ -0.21
CACNA1A-207ENST00000586190 HERV-K104P61576 105 aa13.75□□□□□ -0.21
CACNA1A-207ENST00000586190 AADACL3Q5VUY0 350 aa13.75□□□□□ -0.21
CACNA1A-207ENST00000586190 PLET1Q6UQ28 207 aa13.75□□□□□ -0.21
CACNA1A-207ENST00000586190 BTNL8Q6UX41 500 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms