RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PMS2P11Q13670 270 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 TMEM177Q53S58 311 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 KHDC3LQ587J8 217 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 UTF1Q5T230 341 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 ETV3LQ6ZN32 361 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 CLRN3Q8NCR9 226 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 OR5AN1Q8NGI8 311 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 VSTM2AQ8TAG5 236 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 RAB1CQ92928 201 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 NEIL1Q96FI4 390 aaPredicted RBP9.2□□□□□ -0.94
LIG3-204ENST00000585740 TMEM133Q9H2Q1 129 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 OR51B2Q9Y5P1 312 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 RFNGQ9Y644 331 aa9.2□□□□□ -0.94
LIG3-204ENST00000585740 A1L4Q6 167 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 C9JQL5 133 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 FNDC10F2Z333 226 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 H0YJW9 148 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 H7C2Y5 167 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 NDUFS6O75380 124 aaKnown RBP9.19□□□□□ -0.94
LIG3-204ENST00000585740 KBTBD11O94819 623 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 HSPB1P04792 205 aaKnown RBP9.19□□□□□ -0.94
LIG3-204ENST00000585740 MC5RP33032 325 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 UQCRFS1P47985 274 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 RIPPLY3P57055 190 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 ACOT6Q3I5F7 207 aaPredicted RBP9.19□□□□□ -0.94
LIG3-204ENST00000585740 SPINK9Q5DT21 86 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 ZNF787Q6DD87 383 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 C11orf71Q6IPW1 123 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 VKORC1L1Q8N0U8 176 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 OR5B3Q8NH48 314 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 C8orf46Q8TAG6 207 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 NABP2Q9BQ15 211 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 MRPL20Q9BYC9 149 aaKnown RBP9.19□□□□□ -0.94
LIG3-204ENST00000585740 PLEKHA3Q9HB20 300 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 WDR83OSQ9Y284 106 aa9.19□□□□□ -0.94
LIG3-204ENST00000585740 CENPEQ02224 2701 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 TRAV3A0A0B4J244 114 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 CTXND1A0A1B0GTU2 59 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 MDKP21741 143 aaPredicted RBP9.18□□□□□ -0.94
LIG3-204ENST00000585740 USF1P22415 310 aaPredicted RBP9.18□□□□□ -0.94
LIG3-204ENST00000585740 NPY1RP25929 384 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 CD1BP29016 333 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 FBN2P35556 2912 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 LRBAP50851 2863 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 PRCDQ00LT1 54 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 CDSNQ15517 529 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 SOHLH1Q5JUK2 328 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 FFAR4Q5NUL3 377 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 ZNF841Q6ZN19 808 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 DTX2Q86UW9 622 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 TGIF2LXQ8IUE1 241 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 ABHD12Q8N2K0 398 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 SLC24A4Q8NFF2 622 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 OR10G4Q8NGN3 311 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 OR4C13Q8NGP0 309 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 CLDND2Q8NHS1 167 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 LHX4Q969G2 390 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 ST6GALNAC6Q969X2 333 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 FLYWCH2Q96CP2 140 aaKnown RBP9.18□□□□□ -0.94
LIG3-204ENST00000585740 RCC1LQ96I51 464 aaKnown RBP9.18□□□□□ -0.94
LIG3-204ENST00000585740 HARBI1Q96MB7 349 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 NPCDR1Q9BY65 106 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 ACTR3CQ9C0K3 210 aaPredicted RBP9.18□□□□□ -0.94
LIG3-204ENST00000585740 SLC39A9Q9NUM3 307 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 WASHC3Q9Y3C0 194 aa9.18□□□□□ -0.94
LIG3-204ENST00000585740 AMMECR1Q9Y4X0 333 aaPredicted RBP9.18□□□□□ -0.94
LIG3-204ENST00000585740 LOC102723971A0A1B0GUV8 181 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 A0A1B0GV50 99 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 A0A1W2PN81 502 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 INS-IGF2F8WCM5 200 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 TSPAN4O14817 238 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 CYB5BO43169 146 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 IFNA4P05014 189 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 SRP19P09132 144 aaKnown RBP9.17□□□□□ -0.94
LIG3-204ENST00000585740 RNF224P0DH78 156 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 SAA1P0DJI8 122 aaPredicted RBP9.17□□□□□ -0.94
LIG3-204ENST00000585740 GNLYP22749 145 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 COL8A1P27658 744 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 CHRNA7P36544 502 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 NPBWR1P48145 328 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 ELLP55199 621 aaPredicted RBP9.17□□□□□ -0.94
LIG3-204ENST00000585740 CCL20P78556 96 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 ICAM4Q14773 271 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 VMA21Q3ZAQ7 101 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 RBMS3Q6XE24 437 aaKnown RBP9.17□□□□□ -0.94
LIG3-204ENST00000585740 BEND2Q8NDZ0 799 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 TMEM167AQ8TBQ9 72 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 C17orf50Q8WW18 174 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 P2RX4Q99571 388 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 MAP1LC3BQ9GZQ8 125 aa9.17□□□□□ -0.94
LIG3-204ENST00000585740 PPIAL4CA0A0B4J2A2 164 aa9.16□□□□□ -0.94
LIG3-204ENST00000585740 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
LIG3-204ENST00000585740 PRSS46E5RG02 174 aa9.16□□□□□ -0.94
LIG3-204ENST00000585740 LYNX1G3V0Z9 82 aa9.16□□□□□ -0.94
LIG3-204ENST00000585740 RRHO14718 337 aa9.16□□□□□ -0.94
LIG3-204ENST00000585740 GOSR1O95249 250 aa9.16□□□□□ -0.94
LIG3-204ENST00000585740 LIPFP07098 398 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms