RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 M0QYG6 137 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 MPPED1O15442 326 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 PRH1P02810 166 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 RLN1P04808 185 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 TSPAN5P62079 268 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 RHOGP84095 191 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 KLF5Q13887 457 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-221ENST00000584888 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 LHFPL1Q86WI0 220 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 CMTM1Q8IZ96 169 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 FAM212BQ9NTI7 297 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-221ENST00000584888 ZNF257Q9Y2Q1 563 aa13.66□□□□□ -0.22
ERBB2-221ENST00000584888 ANKRD34BA5PLL1 514 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 FAM223BA6NKX1 122 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 H3BMQ9 156 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 GABARAPH6UMI1 98 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 CD74P04233 296 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 CD3DP04234 171 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 SPNP16150 400 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 LPAR6P43657 344 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 OR2B8PP59922 312 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 RNASE12Q5GAN4 147 aaKnown RBP13.65□□□□□ -0.22
ERBB2-221ENST00000584888 FAM223AQ8IWN6 122 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 FCAMRQ8WWV6 532 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 ISOC1Q96CN7 298 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 FANCD2OSQ96PS1 177 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 TMEM140Q9NV12 185 aa13.65□□□□□ -0.22
ERBB2-221ENST00000584888 PEF1Q9UBV8 284 aaKnown RBP13.65□□□□□ -0.22
ERBB2-221ENST00000584888 KMT2CQ8NEZ4 4911 aaKnown RBP13.64□□□□□ -0.23
ERBB2-221ENST00000584888 RGS5O15539 181 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 TRBV12-3P01733 135 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 AREGP15514 252 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 CTRB1P17538 263 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 TBPP20226 339 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 ZP3P21754 424 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 PHLDA2Q53GA4 152 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 CTRB2Q6GPI1 263 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 C19orf35Q6ZS72 473 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 TMEM229BQ8NBD8 167 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 NECAP1Q8NC96 275 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 FYTTD1Q96QD9 318 aaKnown RBP13.64□□□□□ -0.23
ERBB2-221ENST00000584888 SLIRPQ9GZT3 109 aaKnown RBP13.64□□□□□ -0.23
ERBB2-221ENST00000584888 NXF2Q9GZY0 626 aaKnown RBP13.64□□□□□ -0.23
ERBB2-221ENST00000584888 HRASLSQ9HDD0 168 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 DMRT1Q9Y5R6 373 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 CEPT1Q9Y6K0 416 aa13.64□□□□□ -0.23
ERBB2-221ENST00000584888 MARCH11A6NNE9 402 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 CTDSPLO15194 276 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 PTBP1P26599 531 aaKnown RBP eCLIP13.63□□□□□ -0.23
ERBB2-221ENST00000584888 PSMB6P28072 239 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 MRPS10P82664 201 aaKnown RBP13.63□□□□□ -0.23
ERBB2-221ENST00000584888 SSBP1Q04837 148 aaKnown RBP13.63□□□□□ -0.23
ERBB2-221ENST00000584888 ATP5G2Q06055 141 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 SLC38A6Q8IZM9 456 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 ARRDC1Q8N5I2 433 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 SOSTQ9BQB4 213 aa13.63□□□□□ -0.23
ERBB2-221ENST00000584888 SRSF8Q9BRL6 282 aaKnown RBP13.63□□□□□ -0.23
ERBB2-221ENST00000584888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.62□□□□□ -0.23
ERBB2-221ENST00000584888 IGLC7A0M8Q6 106 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 GP9P14770 177 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 RND3P61587 244 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 RNASE10Q5GAN6 216 aaKnown RBP13.62□□□□□ -0.23
ERBB2-221ENST00000584888 TBC1D26Q86UD7 250 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 SBSPONQ8IVN8 264 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 DMBX1Q8NFW5 382 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 OR4D10Q8NGI6 311 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 OR6Q1Q8NGQ2 317 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 RABL2AQ9UBK7 228 aaPredicted RBP13.62□□□□□ -0.23
ERBB2-221ENST00000584888 RABL2BQ9UNT1 228 aa13.62□□□□□ -0.23
ERBB2-221ENST00000584888 TEX50A0A1B0GTY4 177 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 BMPR1BO00238 502 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 OR2J3O76001 311 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 IGKV1-39P01597 117 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 IGKV1D-39P04432 117 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 RPA2P15927 270 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 EXOSC2Q13868 293 aaKnown RBP13.61□□□□□ -0.23
ERBB2-221ENST00000584888 SMIM4Q8WVI0 70 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 ZNF486Q96H40 463 aaPredicted RBP13.61□□□□□ -0.23
ERBB2-221ENST00000584888 DIRAS2Q96HU8 199 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 OR4C12Q96R67 309 aa13.61□□□□□ -0.23
ERBB2-221ENST00000584888 IGLV11-55A0A075B6I3 123 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 NDUFB8O95169 186 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 KRASP01116 189 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 IFNA6P05013 189 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 S100GP29377 79 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 G6PCP35575 357 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 TAS2R19P59542 299 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 ERVK-16P61578 105 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 C15orf32Q32M92 178 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 STEAP1BQ6NZ63 245 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 TERB2Q8NHR7 220 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 MRGPRFQ96AM1 343 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 SEC22AQ96IW7 307 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 ELOVL1Q9BW60 279 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 NDUFA4L2Q9NRX3 87 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 FBXL7Q9UJT9 491 aa13.6□□□□□ -0.23
ERBB2-221ENST00000584888 STAB2Q8WWQ8 2551 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 DPPA5A6NC42 116 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms