RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 DCTN2Q13561 401 aaKnown RBP10.25□□□□□ -0.77
ERBB2-215ENST00000583391 CENPVQ7Z7K6 275 aaPredicted RBP10.25□□□□□ -0.77
ERBB2-215ENST00000583391 LYG2Q86SG7 212 aa10.25□□□□□ -0.77
ERBB2-215ENST00000583391 ZNF329Q86UD4 541 aa10.25□□□□□ -0.77
ERBB2-215ENST00000583391 LGI3Q8N145 548 aa10.25□□□□□ -0.77
ERBB2-215ENST00000583391 SLC35G3Q8N808 338 aa10.25□□□□□ -0.77
ERBB2-215ENST00000583391 SGMS2Q8NHU3 365 aa10.25□□□□□ -0.77
ERBB2-215ENST00000583391 RRNAD1Q96FB5 475 aaKnown RBP10.25□□□□□ -0.77
ERBB2-215ENST00000583391 TMEM56Q96MV1 263 aa10.25□□□□□ -0.77
ERBB2-215ENST00000583391 TMEM56-RWDD3S4R434 201 aa10.25□□□□□ -0.77
ERBB2-215ENST00000583391 C9orf170A2RU37 121 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 C15orf61A6NNL5 157 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 RBMXL2O75526 392 aaKnown RBP10.24□□□□□ -0.77
ERBB2-215ENST00000583391 SNAPC5O75971 98 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 IL6RP08887 468 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-215ENST00000583391 P0C879 139 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 EGR2P11161 476 aaPredicted RBP10.24□□□□□ -0.77
ERBB2-215ENST00000583391 SPNP16150 400 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 KRTAP10-3P60369 221 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 SLC35B1P78383 322 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 SRSF4Q08170 494 aaKnown RBP10.24□□□□□ -0.77
ERBB2-215ENST00000583391 HIST2H2BDQ6DRA6 164 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 PLET1Q6UQ28 207 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 UNQ5815/PRO19632Q6UWF5 114 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 C11orf44Q8N8P7 122 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 LFNGQ8NES3 379 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 OR52B4Q8NGK2 314 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 OR4A16Q8NH70 328 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 IL22RA2Q969J5 263 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 FYTTD1Q96QD9 318 aaKnown RBP10.24□□□□□ -0.77
ERBB2-215ENST00000583391 SEC22CQ9BRL7 303 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 COMMD5Q9GZQ3 224 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 WNK1Q9H4A3 2382 aa10.24□□□□□ -0.77
ERBB2-215ENST00000583391 A0A1W2PN81 502 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 DBX1A6NMT0 343 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 FBXO24O75426 580 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 PTTG1O95997 202 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 CHRNA7P36544 502 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 CRIP2P52943 208 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-215ENST00000583391 LYZL2Q7Z4W2 148 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 OR5AU1Q8NGC0 362 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 WIPF2Q8TF74 440 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-215ENST00000583391 GON7Q9BXV9 100 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 ZNF580Q9UK33 172 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 PRNDQ9UKY0 176 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 OR51B2Q9Y5P1 312 aa10.23□□□□□ -0.77
ERBB2-215ENST00000583391 A0A0B4J2A0 478 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 A0A1B0GW64 132 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 HMX3A6NHT5 357 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 MSGN1A6NI15 193 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 TEX22C9J3V5 150 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 E7EUB6 86 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 CD28P10747 220 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 MECP2P51608 486 aaKnown RBP10.22□□□□□ -0.77
ERBB2-215ENST00000583391 CFHR3Q02985 330 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 TMEM267Q0VDI3 215 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-215ENST00000583391 C19orf54Q5BKX5 351 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 FAM219AQ8IW50 185 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 CADM3Q8N126 398 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 OR4X2Q8NGF9 303 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 COQ8AQ8NI60 647 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 GPR146Q96CH1 333 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 SPIN2AQ99865 258 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 SPIN2BQ9BPZ2 258 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 HINT2Q9BX68 163 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 QTRT1Q9BXR0 403 aaKnown RBP10.22□□□□□ -0.77
ERBB2-215ENST00000583391 ALX4Q9H161 411 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-215ENST00000583391 TMEM14BQ9NUH8 114 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 CACNG5Q9UF02 275 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 SHPKQ9UHJ6 478 aa10.22□□□□□ -0.77
ERBB2-215ENST00000583391 FOXA2Q9Y261 457 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-215ENST00000583391 VWFP04275 2813 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 TEX50A0A1B0GTY4 177 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 DUXBA0A1W2PPF3 345 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 CGB1A6NKQ9 187 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 INMT-MINDY4F8WBC2 141 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 DUS4LO95620 317 aaKnown RBP10.21□□□□□ -0.77
ERBB2-215ENST00000583391 FGF2P09038 288 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 HOXB5P09067 269 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 NMSQ5H8A3 153 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 ASPHD1Q5U4P2 390 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 Q6ZRM9 215 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 LCNL1Q6ZST4 164 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 LRTM2Q8N967 370 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 OR1L8Q8NGR8 309 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 LSM10Q969L4 123 aaKnown RBP10.21□□□□□ -0.77
ERBB2-215ENST00000583391 ZNF747Q9BV97 191 aa10.21□□□□□ -0.77
ERBB2-215ENST00000583391 A0A0B4J293 547 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 PIGBOS1A0A0B4J2F0 54 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 ST8SIA3O43173 380 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 SOX15O60248 233 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 NXPH3O95157 252 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 REG1AP05451 166 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 TRAPPC2P0DI81 140 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 TRAPPC2BP0DI82 140 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 SULT1A3P0DMM9 295 aa10.2□□□□□ -0.78
ERBB2-215ENST00000583391 SULT1A4P0DMN0 295 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms