RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.65
GGA3-216ENST00000583282 LCNL1Q6ZST4 164 aa11.02□□□□□ -0.65
GGA3-216ENST00000583282 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
GGA3-216ENST00000583282 LFNGQ8NES3 379 aa11.02□□□□□ -0.65
GGA3-216ENST00000583282 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
GGA3-216ENST00000583282 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.65
GGA3-216ENST00000583282 RRNAD1Q96FB5 475 aaKnown RBP11.02□□□□□ -0.65
GGA3-216ENST00000583282 HINT2Q9BX68 163 aa11.02□□□□□ -0.65
GGA3-216ENST00000583282 NUBP2Q9Y5Y2 271 aa11.02□□□□□ -0.65
GGA3-216ENST00000583282 HMX3A6NHT5 357 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 DBX1A6NMT0 343 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 C15orf61A6NNL5 157 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 ATG12O94817 140 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 CDS2O95674 445 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 IGF1P05019 195 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 H2AFB2P0C5Z0 115 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 OR4E1P0C645 316 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 CD28P10747 220 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 UBE2MP61081 183 aaKnown RBP11.01□□□□□ -0.65
GGA3-216ENST00000583282 SRPXP78539 464 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 DHRS2Q13268 280 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 LYG2Q86SG7 212 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 LGI3Q8N145 548 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 OR5AU1Q8NGC0 362 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 OR4A16Q8NH70 328 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 SEC22CQ9BRL7 303 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 COMMD5Q9GZQ3 224 aa11.01□□□□□ -0.65
GGA3-216ENST00000583282 FBN1P35555 2871 aaKnown RBP11.01□□□□□ -0.65
GGA3-216ENST00000583282 TNCP24821 2201 aa11□□□□□ -0.65
GGA3-216ENST00000583282 A0A1W2PRX2 142 aa11□□□□□ -0.65
GGA3-216ENST00000583282 C9orf170A2RU37 121 aa11□□□□□ -0.65
GGA3-216ENST00000583282 MSGN1A6NI15 193 aa11□□□□□ -0.65
GGA3-216ENST00000583282 E7EUB6 86 aa11□□□□□ -0.65
GGA3-216ENST00000583282 NXPH3O95157 252 aa11□□□□□ -0.65
GGA3-216ENST00000583282 SPNP16150 400 aa11□□□□□ -0.65
GGA3-216ENST00000583282 DEFA5Q01523 94 aa11□□□□□ -0.65
GGA3-216ENST00000583282 CFHR3Q02985 330 aa11□□□□□ -0.65
GGA3-216ENST00000583282 SPINK9Q5DT21 86 aa11□□□□□ -0.65
GGA3-216ENST00000583282 TMEM56Q96MV1 263 aa11□□□□□ -0.65
GGA3-216ENST00000583282 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
GGA3-216ENST00000583282 CACNG5Q9UF02 275 aa11□□□□□ -0.65
GGA3-216ENST00000583282 PRNDQ9UKY0 176 aa11□□□□□ -0.65
GGA3-216ENST00000583282 FOXA2Q9Y261 457 aaPredicted RBP11□□□□□ -0.65
GGA3-216ENST00000583282 OR51B2Q9Y5P1 312 aa11□□□□□ -0.65
GGA3-216ENST00000583282 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
GGA3-216ENST00000583282 A0A1B0GW64 132 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 TEX22C9J3V5 150 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 REG1AP05451 166 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 P0C879 139 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 PF4V1P10720 104 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 MAS1LP35410 378 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 CRIP2P52943 208 aaPredicted RBP10.99□□□□□ -0.65
GGA3-216ENST00000583282 C19orf54Q5BKX5 351 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 PLET1Q6UQ28 207 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 C19orf35Q6ZS72 473 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 OR5T1Q8NG75 326 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 COQ8AQ8NI60 647 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
GGA3-216ENST00000583282 IL22RA2Q969J5 263 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 SPIN2AQ99865 258 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 CITED2Q99967 270 aaPredicted RBP10.99□□□□□ -0.65
GGA3-216ENST00000583282 SPIN2BQ9BPZ2 258 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 ZNF747Q9BV97 191 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 GON7Q9BXV9 100 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 ZNF355PQ9NSJ1 428 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 COA4Q9NYJ1 87 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
GGA3-216ENST00000583282 A0A0B4J2A0 478 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 CGB1A6NKQ9 187 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 SOX15O60248 233 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 IL6RP08887 468 aaPredicted RBP10.98□□□□□ -0.65
GGA3-216ENST00000583282 HOXB5P09067 269 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 AREGP15514 252 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 MECP2P51608 486 aaKnown RBP10.98□□□□□ -0.65
GGA3-216ENST00000583282 TMEM267Q0VDI3 215 aaPredicted RBP10.98□□□□□ -0.65
GGA3-216ENST00000583282 DCTN2Q13561 401 aaKnown RBP10.98□□□□□ -0.65
GGA3-216ENST00000583282 TCTEX1D4Q5JR98 221 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 GPR146Q96CH1 333 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 CITED1Q99966 193 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 PALMDQ9NP74 551 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 TMEM14BQ9NUH8 114 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 SHPKQ9UHJ6 478 aa10.98□□□□□ -0.65
GGA3-216ENST00000583282 TCRBV4S1A1TA0A5B7 111 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 ST8SIA3O43173 380 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 PTTG1O95997 202 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 IGHG4P01861 327 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 PRH1P02810 166 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 RPLP1P05386 114 aaKnown RBP10.97□□□□□ -0.65
GGA3-216ENST00000583282 PPIFP30405 207 aaKnown RBP10.97□□□□□ -0.65
GGA3-216ENST00000583282 NSUN5P1Q3KNT7 163 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 CXorf66Q5JRM2 361 aaPredicted RBP10.97□□□□□ -0.65
GGA3-216ENST00000583282 TEX38Q6PEX7 206 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 FAM219AQ8IW50 185 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 OR1L8Q8NGR8 309 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 MS4A10Q96PG2 267 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 PDCD10Q9BUL8 212 aa10.97□□□□□ -0.65
GGA3-216ENST00000583282 A0A0B4J293 547 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms