RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ZNF835Q9Y2P0 537 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 TMEM131Q92545 1883 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 C2orf16Q68DN1 1984 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 FANCMQ8IYD8 2048 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 M0R143 59 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 LINC00869P0C866 280 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 CEACAM8P31997 349 aaPredicted RBP4.88□□□□□ -1.63
RTTN-209ENST00000583043 TOMM20LQ6UXN7 152 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 RNASE6Q93091 150 aaKnown RBP4.88□□□□□ -1.63
RTTN-209ENST00000583043 RARRES2Q99969 163 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 ATG2BQ96BY7 2078 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 IGLV3-9A0A075B6K5 115 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 NDUFB4O95168 129 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 TMEM177Q53S58 311 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 PVRIGQ6DKI7 326 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 ATP5L2Q7Z4Y8 100 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 CABIN1Q9Y6J0 2220 aa4.88□□□□□ -1.63
RTTN-209ENST00000583043 HTR1DP28221 377 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 SSTR5P35346 364 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 CD69Q07108 199 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 ELOBQ15370 118 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 NECAP1Q8NC96 275 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 CA2P00918 260 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 RPL7P18124 248 aaKnown RBP4.87□□□□□ -1.63
RTTN-209ENST00000583043 UBALD1Q8TB05 177 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 FMC1Q96HJ9 113 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 ZMAT5Q9UDW3 170 aaKnown RBP4.87□□□□□ -1.63
RTTN-209ENST00000583043 FZR1Q9UM11 496 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 FOXF2Q12947 444 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 VWC2Q2TAL6 325 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 SAPCD1Q5SSQ6 148 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 IBA57Q5T440 356 aaKnown RBP4.87□□□□□ -1.63
RTTN-209ENST00000583043 MIC13Q5XKP0 118 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 ATRAIDQ6UW56 229 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 ZNF788Q6ZQV5 615 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 TNFRSF19Q9NS68 423 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 GNG7O60262 68 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 TYMSP04818 313 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 OR5AL1P0C617 328 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 FAM87AP0C7U9 286 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 ABHD12Q8N2K0 398 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 SSMEM1Q8WWF3 244 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 PARD6AQ9NPB6 346 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 HSPB8Q9UJY1 196 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 KLF2Q9Y5W3 355 aaPredicted RBP4.87□□□□□ -1.63
RTTN-209ENST00000583043 TRAV39A0A0B4J263 110 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 APCSP02743 223 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 TRGC2P03986 189 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 FAM106CPP0CH98 169 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 ARL14EPLP0DKL9 152 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 MFAP4P55083 255 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 RPL23P62829 140 aaKnown RBP4.87□□□□□ -1.63
RTTN-209ENST00000583043 TEX36Q5VZQ5 186 aa4.87□□□□□ -1.63
RTTN-209ENST00000583043 PHOX2AO14813 284 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 ZNF253O75346 499 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 EIF3GO75821 320 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTTN-209ENST00000583043 HABP2Q14520 560 aaPredicted RBP4.86□□□□□ -1.63
RTTN-209ENST00000583043 SPSB3Q6PJ21 355 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 SLC25A48Q6ZT89 311 aaKnown RBP4.86□□□□□ -1.63
RTTN-209ENST00000583043 FA2HQ7L5A8 372 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 ZNF439Q8NDP4 499 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 TRGC1P0CF51 173 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 RELBQ01201 579 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 ASCL3Q9NQ33 180 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 ONECUT1Q9UBC0 465 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 IL36RNQ9UBH0 155 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 GNB1P62873 340 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 C4orf17Q53FE4 359 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 COQ2Q96H96 371 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 GNB1LQ9BYB4 327 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 DPM3Q9P2X0 92 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 IGKV1-6A0A0C4DH72 117 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 IGHV3-64DA0A0J9YX35 117 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 INS-IGF2F8WCM5 200 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 ORM1P02763 201 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 ALKBH6Q3KRA9 238 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 LRP11Q86VZ4 500 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 LYPD1Q8N2G4 141 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 FAM222BQ8WU58 562 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 IGHV3OR15-7A0A075B7D8 119 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 SAA2-SAA4A0A096LPE2 208 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 PPIAL4CA0A0B4J2A2 164 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 C5orf63A6NC05 138 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 SNURFLB1AK76 121 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 F12P00748 615 aaPredicted RBP4.86□□□□□ -1.63
RTTN-209ENST00000583043 IGHV1-46P01743 117 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 SAA2P0DJI9 122 aaPredicted RBP4.86□□□□□ -1.63
RTTN-209ENST00000583043 PPIAL4GP0DN37 164 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 Q56UQ5 140 aa4.86□□□□□ -1.63
RTTN-209ENST00000583043 ZNF705AQ6ZN79 300 aaPredicted RBP4.86□□□□□ -1.63
RTTN-209ENST00000583043 M0QZ24 198 aa4.85□□□□□ -1.63
RTTN-209ENST00000583043 WNT9BO14905 357 aa4.85□□□□□ -1.63
RTTN-209ENST00000583043 FOXH1O75593 365 aa4.85□□□□□ -1.63
RTTN-209ENST00000583043 ARL16Q0P5N6 197 aa4.85□□□□□ -1.63
RTTN-209ENST00000583043 TMEM155Q4W5P6 130 aa4.85□□□□□ -1.63
RTTN-209ENST00000583043 TREML4Q6UXN2 200 aa4.85□□□□□ -1.63
RTTN-209ENST00000583043 TRGV9Q99603 122 aa4.85□□□□□ -1.63
RTTN-209ENST00000583043 TMEM133Q9H2Q1 129 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms