RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 A0A1W2PQD3 144 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 A6NJ64 397 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 TYMSP04818 313 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 GABRA2P47869 451 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 BLVRAP53004 296 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 EMP2P54851 167 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 CTBP2P56545 445 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 MED21Q13503 144 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 N4BP2L1Q5TBK1 243 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 FAM151BQ6UXP7 276 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 Q6ZS52 159 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 CLDND2Q8NHS1 167 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 SFRP2Q96HF1 295 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 NMNAT3Q96T66 252 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 HES4Q9HCC6 221 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 C15orf41Q9Y2V0 281 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 POLR3HQ9Y535 204 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 PPLO60437 1756 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 KNDC1Q76NI1 1749 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 IFT172Q9UG01 1749 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 KIF1AQ12756 1690 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 LAMC1P11047 1609 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 PPIP5K1Q6PFW1 1433 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 ANKARQ7Z5J8 1434 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 ARHGEF10O15013 1369 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 ABCC11Q96J66 1382 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 ARRDC5A6NEK1 342 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 TXNDC9O14530 226 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 PFDN6O15212 129 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 SSNA1O43805 119 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 NDUFB2O95178 105 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 BPGMP07738 259 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 RPL27AP46776 148 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 TBPL1P62380 186 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 COTL1Q14019 142 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 LGALS9BQ3B8N2 356 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 IQCF2Q8IXL9 164 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 Q8N402 240 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 TMEM156Q8N614 296 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 UBL4BQ8N7F7 174 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 MAP1LC3AQ9H492 121 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 ZNHIT6Q9NWK9 470 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 DICER1Q9UPY3 1922 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 LRRC37A3O60309 1634 aa1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 PHRF1Q9P1Y6 1649 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-205ENST00000581383 DLC1Q96QB1 1528 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 CPSF1Q10570 1443 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 J3QQQ9 107 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 HLA-DRAP01903 254 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 REG1AP05451 166 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 RPL26P61254 145 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 HOXC5Q00444 222 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 ZNF90Q03938 601 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 MLLT11Q13015 90 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 PRDX4Q13162 271 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 HSP90B2PQ58FF3 399 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 TNFAIP8L2Q6P589 184 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 SMIM5Q71RC9 77 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 LHFPL1Q86WI0 220 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 SMCR5Q8TEV8 140 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 RAB2BQ8WUD1 216 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 TTTY13Q9BZ97 58 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 RPL26L1Q9UNX3 145 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 KLK5Q9Y337 293 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 FAM215AQ9Y5M1 114 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 TNS1Q9HBL0 1735 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 TOPAZ1Q8N9V7 1692 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 LRP5O75197 1615 aa1.76□□□□□ -2.13
SMCHD1-205ENST00000581383 OVOS2A0A0G2JMS6 1433 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 OVOS2A0A0J9YW53 1432 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 OVOS2Q6IE36 1432 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 NUP188Q5SRE5 1749 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 ARHGEF28Q8N1W1 1705 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 WDR90Q96KV7 1748 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 CRYBG1Q9Y4K1 1723 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 MYOM1P52179 1685 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 LMO7Q8WWI1 1683 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 ALS2Q96Q42 1657 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 IGLV3-9A0A075B6K5 115 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 ZNF860A6NHJ4 632 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 RFPL4AA6NLU0 287 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 RFPL4AL1F8VTS6 287 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 OCM2P0CE71 109 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 RBM11P57052 281 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 UAP1Q16222 522 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 TPRXLQ17RH7 258 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 SLC36A2Q495M3 483 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 SLC35E3Q7Z769 313 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 SLC51BQ86UW2 128 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 COMMD7Q86VX2 200 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 TMEM161BQ8NDZ6 487 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 OR13C8Q8NGS7 320 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 OR5J2Q8NH18 312 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 HAVCR2Q8TDQ0 301 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 TMEM222Q9H0R3 208 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 HRASLSQ9HDD0 168 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 NKIRAS1Q9NYS0 192 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 TAAR3PQ9P1P4 343 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 DKKL1Q9UK85 242 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms