RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 IGKV3-7A0A075B6H7 116 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 EBAG9O00559 213 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 TGOLN2O43493 480 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 FKBP6O75344 327 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 CRYZL1O95825 349 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 REG1AP05451 166 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 CD2P06729 351 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 ZNF735P0CB33 412 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 CMC4P56277 68 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 RPP30P78346 268 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 HLA-DRB3P79483 266 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 IRF3Q14653 427 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 CDK10Q15131 360 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 FAM90A2PQ658T7 463 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 KDM4DQ6B0I6 523 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 AWAT2Q6E213 333 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 MORN3Q6PF18 240 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 PLET1Q6UQ28 207 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 MMD2Q8IY49 270 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 CENPSQ8N2Z9 138 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 FAM24BQ8N5W8 94 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 GPR148Q8TDV2 347 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 LGALS12Q96DT0 336 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 HDHD3Q9BSH5 251 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 YTHDF1Q9BYJ9 559 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 CLEC5AQ9NY25 188 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 RDH8Q9NYR8 311 aa5.43□□□□□ -1.54
SMARCE1-217ENST00000580654 TRBV6-6A0A0A6YYG2 114 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 TRAV34A0A0B4J273 112 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 CGB1A6NKQ9 187 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 LINC00473A8K010 186 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 K7EMT4 169 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 CHEK1O14757 476 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 FUSP35637 526 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 GBX2P52951 348 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 DEFB131AP59861 70 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 RTL8BQ17RB0 113 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 TRPT1Q86TN4 253 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 SPATA24Q86W54 205 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 AQP12AQ8IXF9 295 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 GBGT1Q8N5D6 347 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 JAGN1Q8N5M9 183 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 ZNRF2Q8NHG8 242 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 NRG4Q8WWG1 115 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 CCDC124Q96CT7 223 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 FAM210BQ96KR6 192 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 CXorf58Q96LI9 332 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 THTPAQ9BU02 230 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 OR2D2Q9H210 308 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 CHMP1AQ9HD42 196 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 PRR13Q9NZ81 148 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 SMPXQ9UHP9 88 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 TBC1D24Q9ULP9 559 aa5.42□□□□□ -1.54
SMARCE1-217ENST00000580654 IGHV3-49A0A0A0MS15 119 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 TRBV5-5A0A0J9YX44 114 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 A4D1N5 150 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 DPPA5A6NC42 116 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 OR2T8A6NH00 312 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 NDUFA4O00483 81 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 SMR3BP02814 79 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 S100A9P06702 114 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 CD3GP09693 182 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 CLEC2LP0C7M8 214 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 GSTT2P0CG29 244 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 GSTT2BP0CG30 244 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 RRASP10301 218 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 HIST1H1BP16401 226 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 NPY1RP25929 384 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 HTR2CP28335 458 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 DUTP33316 252 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 RPL27AP46776 148 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 FAM3BP58499 235 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 LIPKQ5VXJ0 399 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 OR10K2Q6IF99 312 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 SLC25A24Q6NUK1 477 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 MOB1BQ7L9L4 216 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 VKORC1L1Q8N0U8 176 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 ARHGAP24Q8N264 748 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 OSR1Q8TAX0 266 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 NEDD4LQ96PU5 975 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 CIB1Q99828 191 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 NICN1Q9BSH3 213 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 C20orf24Q9BUV8 137 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 RHPN1-AS1Q9BWJ2 59 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 FAM107BQ9H098 131 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 RNF167Q9H6Y7 350 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 Q9N2K0 584 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 ERVK13-1Q9NX77 482 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 PLA2G2DQ9UNK4 145 aa5.41□□□□□ -1.54
SMARCE1-217ENST00000580654 TRBV5-7A0A0A0MS05 114 aa5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 A0A0A6YYD4 124 aa5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 IGHV7-4-1A0A0J9YVY3 117 aa5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 ZNF561-AS1K7EIQ3 104 aa5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 CREBL2O60519 120 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 S100A6P06703 90 aa5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 PTBP1P26599 531 aaKnown RBP eCLIP5.4□□□□□ -1.542e-22■■■■■ 51.6
SMARCE1-217ENST00000580654 RPS11P62280 158 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 TMEM41BQ5BJD5 291 aa5.4□□□□□ -1.54
SMARCE1-217ENST00000580654 ETFRF1Q6IPR1 90 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms