RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 A0A1B0GW64 132 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 CTDSP2O14595 271 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 NOL3O60936 208 aaKnown RBP12.75□□□□□ -0.37
SREBF1-219ENST00000580540 DEFA4P12838 97 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 SPNP16150 400 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 TATDN3Q17R31 274 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 LPCAT3Q6P1A2 487 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 NECAP1Q8NC96 275 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 OR6Q1Q8NGQ2 317 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 RAB2BQ8WUD1 216 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 FCAMRQ8WWV6 532 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 COMMD9Q9P000 198 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 FBXL7Q9UJT9 491 aa12.75□□□□□ -0.37
SREBF1-219ENST00000580540 SORL1Q92673 2214 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 NPIPB5A8MRT5 1133 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 DHFRP00374 187 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 KRASP01116 189 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 PSMB6P28072 239 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 OR2B8PP59922 312 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 KLF5Q13887 457 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-219ENST00000580540 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 RNASE10Q5GAN6 216 aaKnown RBP12.74□□□□□ -0.37
SREBF1-219ENST00000580540 LAX1Q8IWV1 398 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 ABHD1Q96SE0 405 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 MIXL1Q9H2W2 232 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 S4R3C0 116 aa12.74□□□□□ -0.37
SREBF1-219ENST00000580540 DNAH9Q9NYC9 4486 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 MARCH11A6NNE9 402 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 NDUFB8O95169 186 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 CD3DP04234 171 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 PGAM2P15259 253 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 G6PCP35575 357 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 RPL5P46777 297 aaKnown RBP12.73□□□□□ -0.37
SREBF1-219ENST00000580540 TMBIM6P55061 237 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 VAX1Q5SQQ9 334 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 TBC1D26Q86UD7 250 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 SLC38A6Q8IZM9 456 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 OR9G4Q8NGQ1 327 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 C15orf40Q8WUR7 153 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 B9D2Q9BPU9 175 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 HINT2Q9BX68 163 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 MTFP1Q9UDX5 166 aa12.73□□□□□ -0.37
SREBF1-219ENST00000580540 LSM4Q9Y4Z0 139 aaKnown RBP12.73□□□□□ -0.37
SREBF1-219ENST00000580540 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.72□□□□□ -0.37
SREBF1-219ENST00000580540 SNAPC5O75971 98 aa12.72□□□□□ -0.37
SREBF1-219ENST00000580540 CRYGCP07315 174 aa12.72□□□□□ -0.37
SREBF1-219ENST00000580540 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
SREBF1-219ENST00000580540 NSG2Q9Y328 171 aa12.72□□□□□ -0.37
SREBF1-219ENST00000580540 CGB1A6NKQ9 187 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 PPP5D1E7EU14 171 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 BMPR1BO00238 502 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 TPPPO94811 219 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 GP9P14770 177 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 CTRB1P17538 263 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 PI3P19957 117 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 UCP3P55916 312 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 CTRB2Q6GPI1 263 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 C11orf87Q6NUJ2 197 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 OR10W1Q8NGF6 305 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 DIRAS2Q96HU8 199 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 FANCD2OSQ96PS1 177 aa12.71□□□□□ -0.37
SREBF1-219ENST00000580540 QTRT1Q9BXR0 403 aaKnown RBP12.71□□□□□ -0.37
SREBF1-219ENST00000580540 C6orf62Q9GZU0 229 aaPredicted RBP12.71□□□□□ -0.37
SREBF1-219ENST00000580540 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 GABARAPH6UMI1 98 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 HLA-AP01891 365 aaKnown RBP12.7□□□□□ -0.38
SREBF1-219ENST00000580540 TRAPPC2P0DI81 140 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 TRAPPC2BP0DI82 140 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 HIST1H1BP16401 226 aaKnown RBP12.7□□□□□ -0.38
SREBF1-219ENST00000580540 PPP5CP53041 499 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 TAS2R19P59542 299 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 IL18Q14116 193 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 SCGB2B2Q4G0G5 96 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 CLEC19AQ6UXS0 136 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 TMEM229BQ8NBD8 167 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 OR1L8Q8NGR8 309 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 DYNC2LI1Q8TCX1 351 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 EEF1AKMT3Q96AZ1 226 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 ASCL2Q99929 193 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 BCL7BQ9BQE9 202 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 CCDC59Q9P031 241 aaKnown RBP12.7□□□□□ -0.38
SREBF1-219ENST00000580540 OR51B2Q9Y5P1 312 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 SMAD5-AS1Q9Y6J3 95 aa12.7□□□□□ -0.38
SREBF1-219ENST00000580540 IGLC7A0M8Q6 106 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 OR2C1O95371 312 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 RAB3DO95716 219 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 IGLV1-51P01701 117 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 OR13C7P0DN81 318 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 IL34Q6ZMJ4 242 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 OR4D10Q8NGI6 311 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 PEMTQ9UBM1 199 aa12.69□□□□□ -0.38
SREBF1-219ENST00000580540 IGLV11-55A0A075B6I3 123 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 CCDC160A6NGH7 325 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 H3BMQ9 156 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 GGCTO75223 188 aaKnown RBP12.68□□□□□ -0.38
SREBF1-219ENST00000580540 SERPINE2P07093 398 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 CSN3P07498 182 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 TBPP20226 339 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms