RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 OBP2BQ9NPH6 170 aa4.39□□□□□ -1.71
CDH8-206ENST00000580044 HEYLQ9NQ87 328 aaPredicted RBP4.39□□□□□ -1.71
CDH8-206ENST00000580044 TMEM167BQ9NRX6 74 aa4.39□□□□□ -1.71
CDH8-206ENST00000580044 TMEM106BQ9NUM4 274 aa4.39□□□□□ -1.71
CDH8-206ENST00000580044 IL36BQ9NZH7 164 aa4.39□□□□□ -1.71
CDH8-206ENST00000580044 SLC25A10Q9UBX3 287 aaPredicted RBP4.39□□□□□ -1.71
CDH8-206ENST00000580044 BRWD1Q9NSI6 2320 aa4.39□□□□□ -1.71
CDH8-206ENST00000580044 REV3LO60673 3130 aa4.39□□□□□ -1.71
CDH8-206ENST00000580044 MED12Q93074 2177 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 DOCK10Q96BY6 2186 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 LAMA2P24043 3122 aaKnown RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 TRGV5A0A0B4J1U4 118 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 C17orf98A8MV24 154 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 YPEL1O60688 119 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 TNFSF13O75888 250 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 REG1AP05451 166 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 GRPP07492 148 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 SP1P08047 785 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 ZNF705DP0CH99 300 aaPredicted RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 ZNF705BP0CI00 300 aaPredicted RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 RNF224P0DH78 156 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 ARL14EPLP0DKL9 152 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 TDGF1P13385 188 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 SELLP14151 372 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 CRISP2P16562 243 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 CD82P27701 267 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 DUTP33316 252 aaKnown RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 RPL29P47914 159 aaKnown RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 ATP5G3P48201 142 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 TDGF1P3P51864 188 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 EDDM3BP56851 147 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 TAS2R45P59539 299 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 RPL30P62888 115 aaKnown RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 ZNF718Q3SXZ3 478 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 OR10J3Q5JRS4 329 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 SPATA46Q5T0L3 261 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 TOMM20LQ6UXN7 152 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 UNQ6494/PRO21346Q6UXR6 183 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 Q6ZT83 130 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 MYPOPQ86VE0 399 aaPredicted RBP4.38□□□□□ -1.71
CDH8-206ENST00000580044 PNKDQ8N490 385 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 Q8N7P7 452 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 TMEM178AQ8NBL3 297 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 MDS2Q8NDY4 140 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 OR5AU1Q8NGC0 362 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 OR52L2PQ8NGH6 319 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 OR4S2Q8NH73 311 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 SLC25A40Q8TBP6 338 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 GATAD1Q8WUU5 269 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 SDSLQ96GA7 329 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 SLC35E1Q96K37 410 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 YPEL2Q96QA6 119 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 RNF2Q99496 336 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 S1PR3Q99500 378 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 MIEN1Q9BRT3 115 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 VAMP8Q9BV40 100 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 GGTLC1Q9BX51 225 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 GNB1LQ9BYB4 327 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 OR2J1Q9GZK6 312 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 NPVFQ9HCQ7 196 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 ENY2Q9NPA8 101 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 ZNF586Q9NXT0 402 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 SLC45A2Q9UMX9 530 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 GON4LQ3T8J9 2241 aa4.38□□□□□ -1.71
CDH8-206ENST00000580044 KIAA2026Q5HYC2 2103 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 CABIN1Q9Y6J0 2220 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 SAA2-SAA4A0A096LPE2 208 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 TRAV39A0A0B4J263 110 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 TRAV38-1A0A0B4J264 116 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 A0A1B0GWJ7 208 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 C15orf61A6NNL5 157 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 PRSS46E5RG02 174 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 MGST3O14880 152 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 TIMM8AO60220 97 aaPredicted RBP4.37□□□□□ -1.71
CDH8-206ENST00000580044 FCGR3BO75015 233 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 CRYAAP02489 173 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 IL6RP08887 468 aaPredicted RBP4.37□□□□□ -1.71
CDH8-206ENST00000580044 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
CDH8-206ENST00000580044 OR4A8P0C604 315 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 OR5G3P0C626 314 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 LINC00614P0C842 121 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 GYPEP15421 78 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 NPPCP23582 126 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 NPY1RP25929 384 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 GCHFRP30047 84 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 GCH1P30793 250 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 BRS3P32247 399 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 VDAC2P45880 294 aaPredicted RBP4.37□□□□□ -1.71
CDH8-206ENST00000580044 THBS3P49746 956 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 GNG4P50150 75 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 FOXG1P55316 489 aaPredicted RBP4.37□□□□□ -1.71
CDH8-206ENST00000580044 LGALS4P56470 323 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 UBE2G2P60604 165 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 TLE1Q04724 770 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 AESQ08117 197 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 PSG7Q13046 419 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 TIGITQ495A1 244 aa4.37□□□□□ -1.71
CDH8-206ENST00000580044 MBNL2Q5VZF2 373 aaKnown RBP4.37□□□□□ -1.71
CDH8-206ENST00000580044 RASL11AQ6T310 242 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms