RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CDK10Q15131 360 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 RBMY1FQ15415 496 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ZNF124Q15973 351 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 LGALS9BQ3B8N2 356 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 PVRIGQ6DKI7 326 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 OR4A47Q6IF82 309 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 UNQ9165/PRO28630Q6UXU0 137 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 Q6ZS49 121 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 C19orf35Q6ZS72 473 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SLC25A42Q86VD7 318 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 MMD2Q8IY49 270 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 H1FOOQ8IZA3 346 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SPIN2AQ99865 258 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SPAG8Q99932 426 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SPIN2BQ9BPZ2 258 aa9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ZNF430Q9H8G1 570 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-213ENST00000579605 TRAV10A0A0B4J240 114 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 IGHV3-35A0A0C4DH35 117 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 A8MWP6 167 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SAA1P0DJI8 122 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 P0DMU3 169 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 FAM231AP0DMU4 169 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 FAM231CP0DMU5 169 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 RAB3BP20337 219 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CRHBPP24387 322 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ARL6IP1Q15041 203 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 FAM209BQ5JX69 171 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 Q6ZTC4 211 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ZNF367Q7RTV3 350 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 C6orf62Q9GZU0 229 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ATG5Q9H1Y0 275 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 MRPS7Q9Y2R9 242 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 PRELID3BQ9Y3B1 194 aa9.62□□□□□ -0.87
CDK5RAP3-213ENST00000579605 IGKV1D-8A0A087WSZ0 117 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ANKRD65E5RJM6 399 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CTXN2P0C2S0 81 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CD36P16671 472 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 DTYMKP23919 212 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SSX1Q16384 188 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 OR2B11Q5JQS5 317 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SOHLH1Q5JUK2 328 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 C10orf55Q5SWW7 151 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 KCTD9Q7L273 389 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 NRG4Q8WWG1 115 aa9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 MRPL27Q9P0M9 148 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-213ENST00000579605 DPPA5A6NC42 116 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 SLC22A5O76082 557 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 IFNA10P01566 189 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 C8orf88P0DMB2 117 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 NFYAP23511 347 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 TBCEQ15813 527 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CDNFQ49AH0 187 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CENPSQ8N2Z9 138 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 MARC2Q969Z3 335 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CHRDL1Q9BU40 450 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 OR51E2Q9H255 320 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 C5orf66Q9H5L9 145 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ELF5Q9UKW6 265 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 ZNF257Q9Y2Q1 563 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 RBMX2Q9Y388 322 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 OR2W1Q9Y3N9 320 aa9.6□□□□□ -0.87
CDK5RAP3-213ENST00000579605 TRDV1A0A1B0GX56 115 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 HMX3A6NHT5 357 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 TSPAN4O14817 238 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 RPL30P62888 115 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 LAMTOR1Q6IAA8 161 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 OR4S2Q8NH73 311 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 VSTM2AQ8TAG5 236 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 FYTTD1Q96QD9 318 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 OR2A7Q96R45 310 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 RNF126Q9BV68 326 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 NDUFB11Q9NX14 153 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 BLOC1S6Q9UL45 172 aa9.59□□□□□ -0.87
CDK5RAP3-213ENST00000579605 OR4C46A6NHA9 309 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 NPIPB5A8MRT5 1133 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 HLA-DQB1P01920 261 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 CLEC3BP05452 202 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 RPA2P15927 270 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 ADMP35318 185 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 RPL27AP46776 148 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 TMEM187Q14656 261 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 C1orf134Q5TEV5 83 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 HACD4Q5VWC8 232 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 C22orf42Q6IC83 251 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 CNIH2Q6PI25 160 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 ZNF767PQ75MW2 155 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 UBE2DNLQ8IWF7 75 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 VKORC1L1Q8N0U8 176 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 TCTEX1D2Q8WW35 142 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 EEF1AKMT3Q96AZ1 226 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 CNBD2Q96M20 576 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 HSD17B10Q99714 261 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 DCSTAMPQ9H295 470 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 VCX3BQ9H321 246 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 HRH4Q9H3N8 390 aa9.58□□□□□ -0.88
CDK5RAP3-213ENST00000579605 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms