RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ALX4Q9H161 411 aaPredicted RBP12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 C20orf85Q9H1P6 137 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 FBXO7Q9Y3I1 522 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 ATRQ13535 2644 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 OR4E1P0C645 316 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 OR9G9P0C7N8 305 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 CD28P10747 220 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 RAB25P57735 213 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 SRSF4Q08170 494 aaKnown RBP12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 PPP1R1AQ13522 171 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 ECSCRQ19T08 205 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 FAM219AQ8IW50 185 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 MINDY2Q8NBR6 621 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 CITED1Q99966 193 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 NSG2Q9Y328 171 aa12.22□□□□□ -0.45
SLC6A4-205ENST00000579221 TRAV6A0A075B6T7 132 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 C9orf170A2RU37 121 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 IGHG4P01861 327 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 ELANEP08246 267 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 H2AFB2P0C5Z0 115 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 ANXA7P20073 488 aaKnown RBP12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 PPIFP30405 207 aaKnown RBP12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 CFHR3Q02985 330 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 C4orf46Q504U0 113 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM65Q6PI78 240 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 C10orf99Q6UWK7 81 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 C11orf44Q8N8P7 122 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 DUSP18Q8NEJ0 188 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 LHFPL5Q8TAF8 219 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 CASTOR1Q8WTX7 329 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 FYTTD1Q96QD9 318 aaKnown RBP12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 PRR13Q9NZ81 148 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 FOXA2Q9Y261 457 aaPredicted RBP12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 OR51B2Q9Y5P1 312 aa12.21□□□□□ -0.45
SLC6A4-205ENST00000579221 TEX50A0A1B0GTY4 177 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 A0A1W2PN81 502 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 TCRBV4S1A1TA0A5B7 111 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 RBMXL2O75526 392 aaKnown RBP12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 OPN1MWP04001 364 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 CHRNA7P36544 502 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 CD83Q01151 205 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 FOXE3Q13461 319 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 C19orf54Q5BKX5 351 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 CXorf66Q5JRM2 361 aaPredicted RBP12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 C10orf55Q5SWW7 151 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 LYG2Q86SG7 212 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 OR5T1Q8NG75 326 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 LSM10Q969L4 123 aaKnown RBP12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
SLC6A4-205ENST00000579221 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 C15orf61A6NNL5 157 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 IGLV1-40P01703 118 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 HLA-AP01891 365 aaKnown RBP12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 P0C879 139 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 TRAPPC2P0DI81 140 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 TRAPPC2BP0DI82 140 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 MYOD1P15172 320 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 OR2B8PP59922 312 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 ANKRD55Q3KP44 614 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 THOC7Q6I9Y2 204 aaKnown RBP12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 NRARPQ7Z6K4 114 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 SLC35G3Q8N808 338 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 LRTM2Q8N967 370 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 OR5B3Q8NH48 314 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 COQ8AQ8NI60 647 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 GPR146Q96CH1 333 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 PALMDQ9NP74 551 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 ZNF355PQ9NSJ1 428 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 ZFP57Q9NU63 452 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 TMEM14BQ9NUH8 114 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
SLC6A4-205ENST00000579221 A0A0B4J293 547 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 HMX3A6NHT5 357 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 E7EUB6 86 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 DUS4LO95620 317 aaKnown RBP12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 PF4V1P10720 104 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 MECP2P51608 486 aaKnown RBP12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 DHRS2Q13268 280 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 IZUMO4Q1ZYL8 232 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 ASPHD1Q5U4P2 390 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 PLET1Q6UQ28 207 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 ZNF429Q86V71 674 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 TTC9CQ8N5M4 171 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 CITED2Q99967 270 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 QTRT1Q9BXR0 403 aaKnown RBP12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 NDUFA4L2Q9NRX3 87 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 ZNF257Q9Y2Q1 563 aa12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-205ENST00000579221 A0A0G2JRQ6 117 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms