RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 C17orf50Q8WW18 174 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 WDR89Q96FK6 387 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 COMMD5Q9GZQ3 224 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 FOXA2Q9Y261 457 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 TNCP24821 2201 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 K7EPK0 472 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 RRHO14718 337 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 SYNGR2O43760 224 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 SLC25A17O43808 307 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 OR9G9P0C7N8 305 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 F2RL1P55085 397 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 RELBQ01201 579 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 PSG5Q15238 335 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 Q6ZRM9 215 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 FAM71E2Q8N5Q1 922 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 NPBQ8NG41 125 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 DCUN1D4Q92564 292 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 HIPK2Q9H2X6 1198 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 METTL1Q9UBP6 276 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 HSPB7Q9UBY9 170 aa11.16□□□□□ -0.62
CSNK1D-209ENST00000578904 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 IGLV2-23P01705 113 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 TAS2R30P59541 319 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 HSPE1P61604 102 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 CD300CQ08708 224 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 HNF4GQ14541 408 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 IZUMO4Q1ZYL8 232 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 AARDQ4LEZ3 155 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 CXorf66Q5JRM2 361 aaPredicted RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 RBMS3Q6XE24 437 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 C16orf82Q7Z2V1 217 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 SIGLECL1Q8N7X8 197 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 OR1L8Q8NGR8 309 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 ZNF48Q96MX3 618 aaPredicted RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 SSX3Q99909 188 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 SLC25A31Q9H0C2 315 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 ZC4H2Q9NQZ6 224 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 TMEM14BQ9NUH8 114 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 MBD2Q9UBB5 411 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 RCL1Q9Y2P8 373 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 SIGLEC9Q9Y336 463 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 OR51B2Q9Y5P1 312 aa11.15□□□□□ -0.62
CSNK1D-209ENST00000578904 A0A0D9SG52 128 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 A0A1W2PN81 502 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 SMLR1H3BR10 107 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 M0QZK8 103 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 CHST1O43916 411 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 SSSCA1O60232 199 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 NDUFA3O95167 84 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 LYL1P12980 280 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 PAX6P26367 422 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 CHRNA7P36544 502 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 P2RY1P47900 373 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 OR2B8PP59922 312 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 OR5R1Q8NH85 324 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 AJUBAQ96IF1 538 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 RASL11BQ9BPW5 248 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 QTRT1Q9BXR0 403 aaKnown RBP11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 WSB1Q9Y6I7 421 aa11.14□□□□□ -0.63
CSNK1D-209ENST00000578904 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 BOLA2-SMG1P6H3BVE0 249 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 ARPC5O15511 151 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 OR2F2O95006 317 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 HOXA1P49639 335 aaPredicted RBP11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 OR2F1Q13607 317 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 PRSS8Q16651 343 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 ACOT7LQ6ZUV0 252 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 SMIM8Q96KF7 97 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 RBKSQ9H477 322 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 PLEKHA3Q9HB20 300 aa11.13□□□□□ -0.63
CSNK1D-209ENST00000578904 TSC22D2O75157 780 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 NXPH3O95157 252 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 CNIH1O95406 144 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 CRYGBP07316 175 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 ERHP84090 104 aaKnown RBP11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 ZNF345Q14585 488 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 C5orf64Q2M2E5 130 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 TUSC1Q2TAM9 212 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 Q5BKY6 102 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 Q6YL49 198 aa11.12□□□□□ -0.63
CSNK1D-209ENST00000578904 STX12Q86Y82 276 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms