RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 IGKV1-5P01602 117 aa17.5■□□□□ 0.39
PSMD11-206ENST00000578213 AKIRIN2Q53H80 203 aa17.5■□□□□ 0.39
PSMD11-206ENST00000578213 THOC7Q6I9Y2 204 aaKnown RBP17.5■□□□□ 0.39
PSMD11-206ENST00000578213 C12orf54Q6X4T0 127 aa17.5■□□□□ 0.39
PSMD11-206ENST00000578213 WIPF2Q8TF74 440 aaPredicted RBP17.5■□□□□ 0.39
PSMD11-206ENST00000578213 SRSF12Q8WXF0 261 aaKnown RBP17.5■□□□□ 0.39
PSMD11-206ENST00000578213 SPIN2AQ99865 258 aa17.5■□□□□ 0.39
PSMD11-206ENST00000578213 SPIN2BQ9BPZ2 258 aa17.5■□□□□ 0.39
PSMD11-206ENST00000578213 SHPKQ9UHJ6 478 aa17.5■□□□□ 0.39
PSMD11-206ENST00000578213 PSMB11A5LHX3 300 aa17.49■□□□□ 0.39
PSMD11-206ENST00000578213 C15orf61A6NNL5 157 aa17.49■□□□□ 0.39
PSMD11-206ENST00000578213 RPL27AP46776 148 aaKnown RBP17.49■□□□□ 0.39
PSMD11-206ENST00000578213 COMMD1Q8N668 190 aa17.49■□□□□ 0.39
PSMD11-206ENST00000578213 GRPEL2Q8TAA5 225 aa17.49■□□□□ 0.39
PSMD11-206ENST00000578213 NOL4LQ96MY1 436 aaPredicted RBP17.49■□□□□ 0.39
PSMD11-206ENST00000578213 MDFIQ99750 246 aa17.49■□□□□ 0.39
PSMD11-206ENST00000578213 COMMD5Q9GZQ3 224 aa17.49■□□□□ 0.39
PSMD11-206ENST00000578213 TRAV41A0A0B4J266 112 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 OR9G9P0C7N8 305 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 CENPVQ7Z7K6 275 aaPredicted RBP17.48■□□□□ 0.39
PSMD11-206ENST00000578213 SLC35G3Q8N808 338 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 OR5B3Q8NH48 314 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 OR4A16Q8NH70 328 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 COQ8AQ8NI60 647 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 CASTOR1Q8WTX7 329 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 SRSF8Q9BRL6 282 aaKnown RBP17.48■□□□□ 0.39
PSMD11-206ENST00000578213 TMEM14BQ9NUH8 114 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 FOXA2Q9Y261 457 aaPredicted RBP17.48■□□□□ 0.39
PSMD11-206ENST00000578213 FBXO7Q9Y3I1 522 aa17.48■□□□□ 0.39
PSMD11-206ENST00000578213 TRAV3A0A0B4J244 114 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 HAX1O00165 279 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 EGR2P11161 476 aaPredicted RBP17.47■□□□□ 0.39
PSMD11-206ENST00000578213 CFHR3Q02985 330 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 ANKRD55Q3KP44 614 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 C19orf54Q5BKX5 351 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 ZNF429Q86V71 674 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 MARVELD1Q9BSK0 173 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 CACFD1Q9UGQ2 172 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 ZNF257Q9Y2Q1 563 aa17.47■□□□□ 0.39
PSMD11-206ENST00000578213 PRAF2O60831 178 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 IL5P05113 134 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 ECSCRQ19T08 205 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 OR4X2Q8NGF9 303 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 OR1L8Q8NGR8 309 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 PHB2Q99623 299 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 FAM103A1Q9BTL3 118 aaKnown RBP17.46■□□□□ 0.39
PSMD11-206ENST00000578213 ZNF747Q9BV97 191 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 LINC00527Q9UJ94 153 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 TMED3Q9Y3Q3 217 aa17.46■□□□□ 0.39
PSMD11-206ENST00000578213 IGHG4P01861 327 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 PPIFP30405 207 aaKnown RBP17.45■□□□□ 0.38
PSMD11-206ENST00000578213 OR2B8PP59922 312 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 NMSQ5H8A3 153 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 C10orf55Q5SWW7 151 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 TEX38Q6PEX7 206 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 UNQ5815/PRO19632Q6UWF5 114 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 HSD17B13Q7Z5P4 300 aaPredicted RBP17.45■□□□□ 0.38
PSMD11-206ENST00000578213 MINDY2Q8NBR6 621 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 LFNGQ8NES3 379 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 OR5M8Q8NGP6 311 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 MITD1Q8WV92 249 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 QTRT1Q9BXR0 403 aaKnown RBP17.45■□□□□ 0.38
PSMD11-206ENST00000578213 COA4Q9NYJ1 87 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 PRR13Q9NZ81 148 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 OR51B2Q9Y5P1 312 aa17.45■□□□□ 0.38
PSMD11-206ENST00000578213 MSGN1A6NI15 193 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 INMT-MINDY4F8WBC2 141 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 RBMXL2O75526 392 aaKnown RBP17.44■□□□□ 0.38
PSMD11-206ENST00000578213 AARDQ4LEZ3 155 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 LYZL2Q7Z4W2 148 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 C3orf56Q8N813 242 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 OR5AU1Q8NGC0 362 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 ZNF431Q8TF32 576 aaPredicted RBP17.44■□□□□ 0.38
PSMD11-206ENST00000578213 GPN1Q9HCN4 374 aaPredicted RBP17.44■□□□□ 0.38
PSMD11-206ENST00000578213 NSG2Q9Y328 171 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 WSB1Q9Y6I7 421 aa17.44■□□□□ 0.38
PSMD11-206ENST00000578213 A0A0G2JRQ6 117 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 TEX22C9J3V5 150 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 G3V318 75 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 FBXO24O75426 580 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 DHFRP00374 187 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 ELANEP08246 267 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 SULT1A3P0DMM9 295 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 SULT1A4P0DMN0 295 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 SLC25A6P12236 298 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 FOXE3Q13461 319 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 RGS21Q2M5E4 152 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 MRPL41Q8IXM3 137 aaKnown RBP17.43■□□□□ 0.38
PSMD11-206ENST00000578213 PDCD10Q9BUL8 212 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 NDUFA4L2Q9NRX3 87 aa17.43■□□□□ 0.38
PSMD11-206ENST00000578213 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.43■□□□□ 0.38
PSMD11-206ENST00000578213 A0A0B4J293 547 aa17.42■□□□□ 0.38
PSMD11-206ENST00000578213 TEX50A0A1B0GTY4 177 aa17.42■□□□□ 0.38
PSMD11-206ENST00000578213 H3BUA1 57 aa17.42■□□□□ 0.38
PSMD11-206ENST00000578213 TRAPPC2P0DI81 140 aa17.42■□□□□ 0.38
PSMD11-206ENST00000578213 TRAPPC2BP0DI82 140 aa17.42■□□□□ 0.38
PSMD11-206ENST00000578213 HSPE1P61604 102 aaKnown RBP17.42■□□□□ 0.38
PSMD11-206ENST00000578213 ZNF329Q86UD4 541 aa17.42■□□□□ 0.38
PSMD11-206ENST00000578213 RNF152Q8N8N0 203 aa17.42■□□□□ 0.38
PSMD11-206ENST00000578213 FAM110DQ8TAY7 271 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms