RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 FHL3Q13643 280 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 EXOSC2Q13868 293 aaKnown RBP7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 KIAA0141Q14154 515 aaPredicted RBP7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 MRGPRG-AS1Q2M3A8 158 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 FAAP20Q6NZ36 180 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 STEAP1BQ6NZ63 245 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 ARRDC1Q8N5I2 433 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 TMEM229BQ8NBD8 167 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 ADAD2Q8NCV1 583 aaKnown RBP7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 OR4D10Q8NGI6 311 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 OR4A5Q8NH83 315 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 RNASE11Q8TAA1 199 aaKnown RBP7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 DLX4Q92988 240 aaPredicted RBP7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 RANGRFQ9HD47 186 aaPredicted RBP7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 BET1LQ9NYM9 111 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 COMMD9Q9P000 198 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 COPZ2Q9P299 210 aa7.15□□□□□ -1.26
CDKN2A-211ENST00000577854 TRAV3A0A0B4J244 114 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 FAM223BA6NKX1 122 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 DISC1C4P0D8 188 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 TPPPO94811 219 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 AREGP15514 252 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 ZP3P21754 424 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 PIGPP57054 158 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 OR2B8PP59922 312 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 KRTAP10-11P60412 298 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 MEF2DQ14814 521 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 RPEL1Q2QD12 228 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 TRIM16LQ309B1 348 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 PYDC2Q56P42 97 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 C19orf35Q6ZS72 473 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 FAM223AQ8IWN6 122 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 ZFAND1Q8TCF1 268 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 SMIM4Q8WVI0 70 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 USMG5Q96IX5 58 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 OR4C12Q96R67 309 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 ELOVL1Q9BW60 279 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 AKIP1Q9NQ31 210 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 SLC2A9Q9NRM0 540 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 MCUBQ9NWR8 336 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 RABL2AQ9UBK7 228 aaPredicted RBP7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 FBXL7Q9UJT9 491 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 NOTCH3Q9UM47 2321 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 RABL2BQ9UNT1 228 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 C14orf166Q9Y224 244 aaKnown RBP7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 ZNF257Q9Y2Q1 563 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 NSG2Q9Y328 171 aa7.14□□□□□ -1.27
CDKN2A-211ENST00000577854 TEX13DA0A0J9YY54 714 aaPredicted RBP7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 TEX22C9J3V5 150 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 UPK2O00526 184 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 CYB5BO43169 146 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 IGHV3-23P01764 117 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 IL6RP08887 468 aaPredicted RBP7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 AKAIN1P0CW23 69 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 TNFSF8P32971 234 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 AKR1C2P52895 323 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 SYNJ2BPP57105 145 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 TATDN3Q17R31 274 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 C15orf32Q32M92 178 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 H2BFWTQ7Z2G1 175 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 TTC9CQ8N5M4 171 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 CCDC71LQ8N9Z2 235 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 NECAP1Q8NC96 275 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 OR13C8Q8NGS7 320 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 OR4A16Q8NH70 328 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 TERB2Q8NHR7 220 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 MARCH1Q8TCQ1 289 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 MRGPRFQ96AM1 343 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 PRR25Q96S07 402 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 TSC22D3Q99576 134 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 QTRT1Q9BXR0 403 aaKnown RBP7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 SLIRPQ9GZT3 109 aaKnown RBP7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 PTTG2Q9NZH5 202 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 PEF1Q9UBV8 284 aaKnown RBP7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 OR51B2Q9Y5P1 312 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 S4R3C0 116 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 PLXNB1O43157 2135 aa7.13□□□□□ -1.27
CDKN2A-211ENST00000577854 C3orf85A0A1B0GTC6 90 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 WI2-2373I1.2A0A1W2PRP0 233 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 NPIPB5A8MRT5 1133 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 E7EUB6 86 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 ZNF735P0CB33 412 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 TRAPPC2P0DI81 140 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 TRAPPC2BP0DI82 140 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 OR13C7P0DN81 318 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 PSMB6P28072 239 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 INPP1P49441 399 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 UCP3P55916 312 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 SSBP1Q04837 148 aaKnown RBP7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 CNPY1Q3B7I2 92 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 ZNF429Q86V71 674 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 OR4C16Q8NGL9 310 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 OR1L8Q8NGR8 309 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 ZNF486Q96H40 463 aaPredicted RBP7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 PRNDQ9UKY0 176 aa7.12□□□□□ -1.27
CDKN2A-211ENST00000577854 K7EIL1 84 aa7.11□□□□□ -1.27
CDKN2A-211ENST00000577854 CTDSPLO15194 276 aa7.11□□□□□ -1.27
CDKN2A-211ENST00000577854 ATG12O94817 140 aa7.11□□□□□ -1.27
CDKN2A-211ENST00000577854 TRBV12-3P01733 135 aa7.11□□□□□ -1.27
CDKN2A-211ENST00000577854 CD74P04233 296 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms