RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 PCNX3Q9H6A9 2034 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 SNAI2O43623 268 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 SAXO1Q8IYX7 474 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 TMEM256Q8N2U0 113 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 OR1L8Q8NGR8 309 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 ADTRPQ96IZ2 230 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 ONECUT1Q9UBC0 465 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 YLPM1P49750 1951 aaKnown RBP15.08■□□□□ 0
ATPAF1-214ENST00000576409 PINLYPA6NC86 204 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 ZNF716A6NP11 495 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 CEACAM18A8MTB9 384 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 GMPPAQ96IJ6 420 aaPredicted RBP15.08■□□□□ 0
ATPAF1-214ENST00000576409 NDUFAF3Q9BU61 184 aa15.08■□□□□ 0
ATPAF1-214ENST00000576409 J3KRW8 73 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 IGFBP2P18065 325 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 TNFSF10P50591 281 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 RND2P52198 227 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 HSPE1P61604 102 aaKnown RBP15.07■□□□□ 0
ATPAF1-214ENST00000576409 VWA1Q6PCB0 445 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 PRNTQ86SH4 94 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 OR8G5Q8NG78 346 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 SAP30LQ9HAJ7 183 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 CALYQ9NYX4 217 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 NEU1Q99519 415 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 GAL3ST2Q9H3Q3 398 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 CLEC5AQ9NY25 188 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 A0A1B0GUS0 222 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 MPDU1O75352 247 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 JOSD1Q15040 202 aaPredicted RBP15.07■□□□□ 0
ATPAF1-214ENST00000576409 PEAR1Q5VY43 1037 aaPredicted RBP15.07■□□□□ 0
ATPAF1-214ENST00000576409 OR4F17Q8NGA8 305 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 RNASE7Q9H1E1 156 aaKnown RBP15.07■□□□□ 0
ATPAF1-214ENST00000576409 ASCL3Q9NQ33 180 aa15.07■□□□□ 0
ATPAF1-214ENST00000576409 TBL2Q9Y4P3 447 aaKnown RBP15.07■□□□□ 0
ATPAF1-214ENST00000576409 TMEM210A6NLX4 147 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 CA2P00918 260 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 HOXB1P14653 301 aaPredicted RBP15.06■□□□□ 0
ATPAF1-214ENST00000576409 GTF2H5Q6ZYL4 71 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 LRTM2Q8N967 370 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 SPSB4Q96A44 273 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 PGLYRP4Q96LB8 373 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 THADAQ6YHU6 1953 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 PRSS1P07477 247 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 PTGDSP41222 190 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 KIR2DS2P43631 304 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 WDYHV1Q96HA8 205 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 PILRBQ9UKJ0 227 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 ZNF785A8K8V0 405 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 K7ESF4 209 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 GPR6P46095 362 aaPredicted RBP15.06■□□□□ 0
ATPAF1-214ENST00000576409 PRB3Q04118 309 aaPredicted RBP15.06■□□□□ 0
ATPAF1-214ENST00000576409 COTL1Q14019 142 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 SPSB3Q6PJ21 355 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 NPIPB3Q92617 1050 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 AAMDCQ9H7C9 122 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 AMMECR1Q9Y4X0 333 aaPredicted RBP15.06■□□□□ 0
ATPAF1-214ENST00000576409 SLC25A17O43808 307 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 IL6RP08887 468 aaPredicted RBP15.06■□□□□ 0
ATPAF1-214ENST00000576409 HIST1H1EP10412 219 aaKnown RBP15.06■□□□□ 0
ATPAF1-214ENST00000576409 RELBQ01201 579 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 CDPF1Q6NVV7 123 aa15.06■□□□□ 0
ATPAF1-214ENST00000576409 PRRC2CQ9Y520 2896 aaKnown RBP15.05■□□□□ 0
ATPAF1-214ENST00000576409 CA1P00915 261 aaPredicted RBP15.05■□□□□ 0
ATPAF1-214ENST00000576409 IGLV3-19P01714 112 aa15.05■□□□□ 0
ATPAF1-214ENST00000576409 TRIP6Q15654 476 aaKnown RBP15.05■□□□□ 0
ATPAF1-214ENST00000576409 DNM1P46Q6ZS02 220 aa15.05■□□□□ 0
ATPAF1-214ENST00000576409 MED13Q9UHV7 2174 aa15.05■□□□□ 0
ATPAF1-214ENST00000576409 KLF7O75840 302 aaPredicted RBP15.05■□□□□ -0
ATPAF1-214ENST00000576409 RBPJQ06330 500 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 NMSQ5H8A3 153 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 TMEM108Q6UXF1 575 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 C20orf204Q6ZNR8 217 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 OCC1Q8TAD7 63 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 IGKV3-7A0A075B6H7 116 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 OR4A8P0C604 315 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 C5orf17Q8NAS9 161 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 OR8B2Q96RD0 313 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 SEBOXQ9HB31 216 aaPredicted RBP15.05■□□□□ -0
ATPAF1-214ENST00000576409 PCNX2A6NKB5 2137 aa15.05■□□□□ -0
ATPAF1-214ENST00000576409 IGKV1-5P01602 117 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 HOXA4Q00056 320 aaPredicted RBP15.04■□□□□ -0
ATPAF1-214ENST00000576409 ZNF738Q8NE65 137 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 CDX2Q99626 313 aaPredicted RBP15.04■□□□□ -0
ATPAF1-214ENST00000576409 UQCR10Q9UDW1 63 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 MALRD1Q5VYJ5 2156 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 IGHV3-35A0A0C4DH35 117 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 ANOS1P23352 680 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 GFRALQ6UXV0 394 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 MIR17HGQ75NE6 70 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 IFITM10A6NMD0 228 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 OR4B1Q8NGF8 309 aa15.04■□□□□ -0
ATPAF1-214ENST00000576409 ZNF703Q9H7S9 590 aaPredicted RBP15.04■□□□□ -0
ATPAF1-214ENST00000576409 DPRXA6NFQ7 191 aa15.03■□□□□ -0
ATPAF1-214ENST00000576409 ADMP35318 185 aa15.03■□□□□ -0
ATPAF1-214ENST00000576409 ZNF124Q15973 351 aa15.03■□□□□ -0
ATPAF1-214ENST00000576409 ZCCHC14Q8WYQ9 949 aaKnown RBP15.03■□□□□ -0
ATPAF1-214ENST00000576409 MAP1LC3CQ9BXW4 147 aa15.03■□□□□ -0
ATPAF1-214ENST00000576409 A0A0C4DFX4 3053 aa15.03■□□□□ -0
ATPAF1-214ENST00000576409 MUC21A0A0G2JKD1 596 aa15.03■□□□□ -0
ATPAF1-214ENST00000576409 MUC21A0A140T8X8 626 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms