RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 HOXA1P49639 335 aaPredicted RBP13.15□□□□□ -0.3
ERCC4-208ENST00000576348 SPCS3P61009 180 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 VAMP2P63027 116 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
ERCC4-208ENST00000576348 PJVKQ0ZLH3 352 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 CXorf66Q5JRM2 361 aaPredicted RBP13.15□□□□□ -0.3
ERCC4-208ENST00000576348 ZNF429Q86V71 674 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
ERCC4-208ENST00000576348 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 OR5B3Q8NH48 314 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 PPP1R1CQ8WVI7 109 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 ST6GAL2Q96JF0 529 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 PRDM13Q9H4Q3 707 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 PLSCR3Q9NRY6 295 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 POMT1Q9Y6A1 747 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 TLN2Q9Y4G6 2542 aa13.15□□□□□ -0.3
ERCC4-208ENST00000576348 FGF16O43320 207 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 SSSCA1O60232 199 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 PITX3O75364 302 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 CA2P00918 260 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 MBPP02686 304 aaPredicted RBP13.14□□□□□ -0.31
ERCC4-208ENST00000576348 OPN1MWP04001 364 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 IL6RP08887 468 aaPredicted RBP13.14□□□□□ -0.31
ERCC4-208ENST00000576348 OPN1MW2P0DN77 364 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 OPN1MW3P0DN78 364 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 HSPE1P61604 102 aaKnown RBP13.14□□□□□ -0.31
ERCC4-208ENST00000576348 TNFRSF9Q07011 255 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 RAB32Q13637 225 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 TMEM86BQ8N661 226 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 ZNF257Q9Y2Q1 563 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 AKAP9Q99996 3911 aa13.14□□□□□ -0.31
ERCC4-208ENST00000576348 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 RPL27AP46776 148 aaKnown RBP13.13□□□□□ -0.31
ERCC4-208ENST00000576348 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERCC4-208ENST00000576348 SPINK9Q5DT21 86 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 C9orf152Q5JTZ5 239 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 TCTE3Q8IZS6 198 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 FAM71E2Q8N5Q1 922 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 Q8N9W7 124 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 OR52E5Q8NH55 327 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
ERCC4-208ENST00000576348 NEURL2Q9BR09 285 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 RBKSQ9H477 322 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 PLEKHA3Q9HB20 300 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 HSPB7Q9UBY9 170 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
ERCC4-208ENST00000576348 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
ERCC4-208ENST00000576348 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 A0A1W2PN81 502 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 K7EPK0 472 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 FCN1O00602 326 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 SYNGR2O43760 224 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 GPR137BO60478 399 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 MPC2O95563 127 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 HLA-DRB1P01911 266 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 IAPPP10997 89 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 MYOD1P15172 320 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 CHRNA7P36544 502 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 COMPP49747 757 aaPredicted RBP13.12□□□□□ -0.31
ERCC4-208ENST00000576348 ID3Q02535 119 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 FXYD3Q14802 87 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 ARSJQ5FYB0 599 aaPredicted RBP13.12□□□□□ -0.31
ERCC4-208ENST00000576348 C5orf56Q8N8D9 126 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 DUX5Q96PT3 197 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 JMJD8Q96S16 334 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 HIPK2Q9H2X6 1198 aa13.12□□□□□ -0.31
ERCC4-208ENST00000576348 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
ERCC4-208ENST00000576348 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 CHST1O43916 411 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
ERCC4-208ENST00000576348 RPL23AP62750 156 aaKnown RBP13.11□□□□□ -0.31
ERCC4-208ENST00000576348 PRCDQ00LT1 54 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 IL15RAQ13261 267 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 ZFP69Q49AA0 526 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 C10orf55Q5SWW7 151 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 DTD1Q8TEA8 209 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 SRSF12Q8WXF0 261 aaKnown RBP13.11□□□□□ -0.31
ERCC4-208ENST00000576348 CIB3Q96Q77 187 aaPredicted RBP13.11□□□□□ -0.31
ERCC4-208ENST00000576348 RAB40CQ96S21 281 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 PARP11Q9NR21 331 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 MBD2Q9UBB5 411 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 VPS13CQ709C8 3753 aa13.11□□□□□ -0.31
ERCC4-208ENST00000576348 DNAJC9-AS1A6NH13 148 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 DEDDO75618 318 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 LY86O95711 162 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 FAM157CP0CG43 387 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
ERCC4-208ENST00000576348 CX3CL1P78423 397 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 AARDQ4LEZ3 155 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 DCUN1D4Q92564 292 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 ZC4H2Q9NQZ6 224 aa13.1□□□□□ -0.31
ERCC4-208ENST00000576348 PAIP2BQ9ULR5 123 aaKnown RBP13.1□□□□□ -0.31
ERCC4-208ENST00000576348 NAV3Q8IVL0 2385 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms