RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 OR52B4Q8NGK2 314 aa6.74□□□□□ -1.33
NUP88-211ENST00000575976 GRPEL2Q8TAA5 225 aa6.74□□□□□ -1.33
NUP88-211ENST00000575976 ABHD5Q8WTS1 349 aa6.74□□□□□ -1.33
NUP88-211ENST00000575976 ARPC1AQ92747 370 aa6.74□□□□□ -1.33
NUP88-211ENST00000575976 RBPMSQ93062 196 aaKnown RBP6.74□□□□□ -1.33
NUP88-211ENST00000575976 IL22RA2Q969J5 263 aa6.74□□□□□ -1.33
NUP88-211ENST00000575976 WSB1Q9Y6I7 421 aa6.74□□□□□ -1.33
NUP88-211ENST00000575976 NOTCH1P46531 2555 aa6.74□□□□□ -1.33
NUP88-211ENST00000575976 MSGN1A6NI15 193 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 CGB1A6NKQ9 187 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 E7EUB6 86 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 INMT-MINDY4F8WBC2 141 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 G3V318 75 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 CREBL2O60519 120 aaPredicted RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 SNAPC5O75971 98 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 P0C879 139 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 HLA-GP17693 338 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 MAS1LP35410 378 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 RPL27AP46776 148 aaKnown RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 CRIP2P52943 208 aaPredicted RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 OR2B8PP59922 312 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 SRPXP78539 464 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 ECSCRQ19T08 205 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 PLET1Q6UQ28 207 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 C10orf99Q6UWK7 81 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 C12orf54Q6X4T0 127 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 Q6ZRM9 215 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 LYZL2Q7Z4W2 148 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 CENPVQ7Z7K6 275 aaPredicted RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 ZNF329Q86UD4 541 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 LRTM2Q8N967 370 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 LFNGQ8NES3 379 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 SGMS2Q8NHU3 365 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 RNASE11Q8TAA1 199 aaKnown RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 WIPF2Q8TF74 440 aaPredicted RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 SRSF12Q8WXF0 261 aaKnown RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 GPR146Q96CH1 333 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 RRNAD1Q96FB5 475 aaKnown RBP6.73□□□□□ -1.33
NUP88-211ENST00000575976 SEC22CQ9BRL7 303 aa6.73□□□□□ -1.33
NUP88-211ENST00000575976 TRAV41A0A0B4J266 112 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 A0A0B4J293 547 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 A0A0B4J2A0 478 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 TEX50A0A1B0GTY4 177 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 A0A1B0GW64 132 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 PSMB11A5LHX3 300 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 HMX3A6NHT5 357 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 C15orf61A6NNL5 157 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 DUS4LO95620 317 aaKnown RBP6.72□□□□□ -1.33
NUP88-211ENST00000575976 PTTG1O95997 202 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 IL5P05113 134 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 APELAP0DMC3 54 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 VDAC1P21796 283 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 PPIFP30405 207 aaKnown RBP6.72□□□□□ -1.33
NUP88-211ENST00000575976 CFHR3Q02985 330 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 SRSF4Q08170 494 aaKnown RBP6.72□□□□□ -1.33
NUP88-211ENST00000575976 TMEM267Q0VDI3 215 aaPredicted RBP6.72□□□□□ -1.33
NUP88-211ENST00000575976 C19orf54Q5BKX5 351 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 ASPHD1Q5U4P2 390 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 HIST2H2BDQ6DRA6 164 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 UNQ5815/PRO19632Q6UWF5 114 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 FAM219AQ8IW50 185 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 OR4A16Q8NH70 328 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 COQ8AQ8NI60 647 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 ZNF431Q8TF32 576 aaPredicted RBP6.72□□□□□ -1.33
NUP88-211ENST00000575976 CHPT1Q8WUD6 406 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 WFDC12Q8WWY7 111 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 LSM10Q969L4 123 aaKnown RBP6.72□□□□□ -1.33
NUP88-211ENST00000575976 FYTTD1Q96QD9 318 aaKnown RBP6.72□□□□□ -1.33
NUP88-211ENST00000575976 PHB2Q99623 299 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 MARVELD1Q9BSK0 173 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 COMMD5Q9GZQ3 224 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 SHPKQ9UHJ6 478 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 ZNF580Q9UK33 172 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 PRNDQ9UKY0 176 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 OR51B2Q9Y5P1 312 aa6.72□□□□□ -1.33
NUP88-211ENST00000575976 A0A1W2PN81 502 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 DUXBA0A1W2PPF3 345 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 TEX22C9J3V5 150 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 SOX15O60248 233 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 RBMXL2O75526 392 aaKnown RBP6.71□□□□□ -1.34
NUP88-211ENST00000575976 FGF2P09038 288 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 HOXB5P09067 269 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 CHRNA7P36544 502 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 SLC35B1P78383 322 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 AKIRIN2Q53H80 203 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 NMSQ5H8A3 153 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 TCTEX1D4Q5JR98 221 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 C11orf44Q8N8P7 122 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 MINDY2Q8NBR6 621 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 OR5T1Q8NG75 326 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 OR5AU1Q8NGC0 362 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 OR1L8Q8NGR8 309 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 MITD1Q8WV92 249 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 SPIN2AQ99865 258 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 SPIN2BQ9BPZ2 258 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 QTRT1Q9BXR0 403 aaKnown RBP6.71□□□□□ -1.34
NUP88-211ENST00000575976 GON7Q9BXV9 100 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 TMEM14BQ9NUH8 114 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms