RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 CTSZQ9UBR2 303 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 HIVEP3Q5T1R4 2406 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 PYY3Q5JQD4 70 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 CST9LP1Q5W188 147 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 TMEM200BQ69YZ2 307 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
USP43-205ENST00000574408 MUC15Q8N387 334 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 RPUSD4Q96CM3 377 aaKnown RBP8.58□□□□□ -1.04
USP43-205ENST00000574408 ADTRPQ96IZ2 230 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 PSMG3Q9BT73 122 aaPredicted RBP8.58□□□□□ -1.04
USP43-205ENST00000574408 TMEM147Q9BVK8 224 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 TNCP24821 2201 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 C5orf52A6NGY3 159 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 PMS2P5A8MQ11 134 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 DVL1O14640 695 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 SCGB1D1O95968 90 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 RELBQ01201 579 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 ZNF429Q86V71 674 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 ZCCHC14Q8WYQ9 949 aaKnown RBP8.58□□□□□ -1.04
USP43-205ENST00000574408 PINX1Q96BK5 328 aaKnown RBP8.58□□□□□ -1.04
USP43-205ENST00000574408 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 KALRNO60229 2985 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 LYNX1G3V0Z9 82 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 H3BQ15 152 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 LYNX1P0DP58 116 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 SPCS3P61009 180 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 DLK1P80370 383 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 DPPA3Q6W0C5 159 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 HEPN1Q6WQI6 88 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 HEYLQ9NQ87 328 aaPredicted RBP8.58□□□□□ -1.04
USP43-205ENST00000574408 KIAA1456Q9P272 454 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 MALRD1Q5VYJ5 2156 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 MED13LQ71F56 2210 aa8.58□□□□□ -1.04
USP43-205ENST00000574408 C15orf62A8K5M9 175 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 IFNA10P01566 189 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 HBE1P02100 147 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 RAB39BQ96DA2 213 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 RBFOX3A6NFN3 312 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 TNFRSF13BO14836 293 aaPredicted RBP8.57□□□□□ -1.04
USP43-205ENST00000574408 SNRPCP09234 159 aaKnown RBP8.57□□□□□ -1.04
USP43-205ENST00000574408 ATP6V1FQ16864 119 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 AARDQ4LEZ3 155 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 OR4A47Q6IF82 309 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 UNQ6494/PRO21346Q6UXR6 183 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 A0A1W2PPQ1 181 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 CT45A6P0DMU7 189 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 CT45A5P0DMU8 189 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 CT45A7P0DMV0 189 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
USP43-205ENST00000574408 FGF7P21781 194 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 SERF2P84101 59 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 ZNF705AQ6ZN79 300 aaPredicted RBP8.57□□□□□ -1.04
USP43-205ENST00000574408 PARD6GQ9BYG4 376 aaPredicted RBP8.57□□□□□ -1.04
USP43-205ENST00000574408 SLC35D1Q9NTN3 355 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 TCF19Q9Y242 345 aa8.57□□□□□ -1.04
USP43-205ENST00000574408 TET2Q6N021 2002 aaPredicted RBP8.56□□□□□ -1.04
USP43-205ENST00000574408 LOXP28300 417 aaPredicted RBP8.56□□□□□ -1.04
USP43-205ENST00000574408 GPX4P36969 197 aaPredicted RBP8.56□□□□□ -1.04
USP43-205ENST00000574408 TFF3Q07654 80 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 OR10A7Q8NGE5 316 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 HIPK2Q9H2X6 1198 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 CACNA1BQ00975 2339 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 A0A1B0GW64 132 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 PLA2G5P39877 138 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 ZNF124Q15973 351 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 RTL8BQ17RB0 113 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 ZNF672Q499Z4 452 aaPredicted RBP8.56□□□□□ -1.04
USP43-205ENST00000574408 OR52E5Q8NH55 327 aa8.56□□□□□ -1.04
USP43-205ENST00000574408 RCC1LQ96I51 464 aaKnown RBP8.56□□□□□ -1.04
USP43-205ENST00000574408 C15orf61A6NNL5 157 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 HRASP01112 189 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 IGKV1-16P04430 117 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 ZNF726P1Q15940 193 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 TMEM41BQ5BJD5 291 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 ZNF787Q6DD87 383 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 TGIF2LXQ8IUE1 241 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 OR13D1Q8NGV5 346 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 RBM14Q96PK6 669 aaKnown RBP8.55□□□□□ -1.04
USP43-205ENST00000574408 HINT2Q9BX68 163 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 MRPL20Q9BYC9 149 aaKnown RBP8.55□□□□□ -1.04
USP43-205ENST00000574408 KAAG1Q9UBP8 84 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 KLF2Q9Y5W3 355 aaPredicted RBP8.55□□□□□ -1.04
USP43-205ENST00000574408 WNK2Q9Y3S1 2297 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 SPTAN1Q13813 2472 aaKnown RBP8.55□□□□□ -1.04
USP43-205ENST00000574408 COL8A2P25067 703 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 VDAC2P45880 294 aaPredicted RBP8.55□□□□□ -1.04
USP43-205ENST00000574408 REG1BP48304 166 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 GNB2P62879 340 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 SSX7Q7RTT5 188 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 ABHD12Q8N2K0 398 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 OR10X1Q8NGY0 326 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 TIMM9Q9Y5J7 89 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 CXCL1P09341 107 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 MYOD1P15172 320 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 CD33P20138 364 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 RPL29P47914 159 aaKnown RBP8.55□□□□□ -1.04
USP43-205ENST00000574408 SP5Q6BEB4 398 aaPredicted RBP8.55□□□□□ -1.04
USP43-205ENST00000574408 ACSM6Q6P461 480 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms