RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ECI1P42126 302 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 UCP3P55916 312 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 OR2B8PP59922 312 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 RHOGP84095 191 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 DEFB121Q5J5C9 76 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 ACSM6Q6P461 480 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 TBC1D26Q86UD7 250 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 TMEM229BQ8NBD8 167 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 DMBX1Q8NFW5 382 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 OR4A5Q8NH83 315 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 MRGPRFQ96AM1 343 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 DIRAS2Q96HU8 199 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 SPIN2AQ99865 258 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 SPIN2BQ9BPZ2 258 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 SOSTQ9BQB4 213 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 GPR61Q9BZJ8 451 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 C6orf62Q9GZU0 229 aaPredicted RBP7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 NXF2Q9GZY0 626 aaKnown RBP7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 SLC2A9Q9NRM0 540 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 S4R3C0 116 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 A0A0G2JLM5 398 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 TEX50A0A1B0GTY4 177 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 DBX1A6NMT0 343 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 CREBL2O60519 120 aaPredicted RBP7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 NDUFB8O95169 186 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 RAB3DO95716 219 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 KRASP01116 189 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 IGHV3-23P01764 117 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 CRYGCP07315 174 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 CTRB1P17538 263 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 PSMB6P28072 239 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 TNFSF8P32971 234 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 IL18Q14116 193 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 RNASE10Q5GAN6 216 aaKnown RBP7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 CTRB2Q6GPI1 263 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 STEAP1BQ6NZ63 245 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 HAPLN4Q86UW8 402 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 CMTM1Q8IZ96 169 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 OR10W1Q8NGF6 305 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 CD300LFQ8TDQ1 290 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 USMG5Q96IX5 58 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 RANGRFQ9HD47 186 aaPredicted RBP7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 PEF1Q9UBV8 284 aaKnown RBP7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 DMRT1Q9Y5R6 373 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 SORL1Q92673 2214 aa7.84□□□□□ -1.15
GTF3C1-213ENST00000571886 IGLC7A0M8Q6 106 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 CCDC160A6NGH7 325 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 MARCH11A6NNE9 402 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 NPIPB5A8MRT5 1133 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 BMPR1BO00238 502 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 CTDSPLO15194 276 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 IFNA6P05013 189 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 PGAM2P15259 253 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 PPP5CP53041 499 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 TAS2R19P59542 299 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 ATP5G2Q06055 141 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 IZUMO4Q1ZYL8 232 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 IL34Q6ZMJ4 242 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 SLC38A6Q8IZM9 456 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 MCFD2Q8NI22 146 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 SMIM4Q8WVI0 70 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 BORCS5Q969J3 196 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 AIFM2Q9BRQ8 373 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 COMMD9Q9P000 198 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 FBXL7Q9UJT9 491 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 ZNF257Q9Y2Q1 563 aa7.83□□□□□ -1.16
GTF3C1-213ENST00000571886 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 FAM223BA6NKX1 122 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 PPP5D1E7EU14 171 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 NOL3O60936 208 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 SAP30O75446 220 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 HLA-AP01891 365 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 SPNP16150 400 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 PIGPP57054 158 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 SYNJ2BPP57105 145 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 RND3P61587 244 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 EXOSC2Q13868 293 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 KLK9Q2XQG4 91 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 C15orf32Q32M92 178 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 SP6Q3SY56 376 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 SCGB2B2Q4G0G5 96 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 LINC00299Q6ZSB3 139 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 ZNF429Q86V71 674 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 SLC25A42Q86VD7 318 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 FAM223AQ8IWN6 122 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 ARRDC1Q8N5I2 433 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 OR13C8Q8NGS7 320 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 TERB2Q8NHR7 220 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 MARCH1Q8TCQ1 289 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 C15orf40Q8WUR7 153 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 SEC22AQ96IW7 307 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 TP53RKQ96S44 253 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 KLK9Q9UKQ9 250 aa7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 LSM4Q9Y4Z0 139 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-213ENST00000571886 IGLV11-55A0A075B6I3 123 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 FABP12A6NFH5 140 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 GSTZ1O43708 216 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms