RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DOCK11Q5JSL3 2073 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 WNK2Q9Y3S1 2297 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 DNHD1Q96M86 4753 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 A0A087WXM4 84 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 CLPSL1A2RUU4 121 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 ODF3BA8MYP8 253 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 BUB1B-PAK6H3BSN5 160 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 SDCBPO00560 298 aaPredicted RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 SLC17A2O00624 439 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 PDCD6O75340 191 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 CLN5O75503 358 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 IGLV1-47P01700 117 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 GAPDHP04406 335 aaKnown RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 CD37P11049 281 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 RAB3BP20337 219 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 OMGP23515 440 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 GADD45AP24522 165 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 CD34P28906 385 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 BLVRBP30043 206 aaPredicted RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 RAB7AP51149 207 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 RPS27AP62979 156 aaKnown RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 INSL4Q14641 139 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 NEDD8Q15843 81 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 ECSCRQ19T08 205 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 Q1RN00 199 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 C2orf76Q3KRA6 126 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 Q3ZCU0 254 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 LINC00242Q5T6M2 205 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 FAM27D1Q5T7N8 215 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 SYT6Q5T7P8 510 aaPredicted RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 PRAMEF5Q5TYX0 476 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 RSBN1Q5VWQ0 802 aaPredicted RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 OLFML2AQ68BL7 652 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 HCP5Q6MZN7 132 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 CD200R1LQ6Q8B3 271 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 TMEM91Q6ZNR0 172 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 MOB1BQ7L9L4 216 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 C8orf31Q8N9H6 132 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 TMEM104Q8NE00 496 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 OR56B1Q8NGI3 324 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 ARL11Q969Q4 196 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 PTX4Q96A99 478 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 FAM3DQ96BQ1 224 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 GALMQ96C23 342 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 COQ2Q96H96 371 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 KCTD7Q96MP8 289 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 RCHY1Q96PM5 261 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 BANF2Q9H503 90 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 C16orf95Q9H693 158 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 RANBP3Q9H6Z4 567 aaPredicted RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 OR2S2Q9NQN1 319 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 CALYQ9NYX4 217 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 GNG12Q9UBI6 72 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 RAB22AQ9UL26 194 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 AK6Q9Y3D8 172 aaKnown RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 HILPDAQ9Y5L2 63 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 SOX21Q9Y651 276 aaPredicted RBP2.95□□□□□ -1.94
NUP88-202ENST00000570937 KIF25-AS1Q9Y6Z4 181 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 ATRQ13535 2644 aa2.95□□□□□ -1.94
NUP88-202ENST00000570937 ARHGAP32A7KAX9 2087 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TRAV34A0A0B4J273 112 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 LOC100506127A0A0U1RQW1 187 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 IFITM5A6NNB3 132 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 SRRM4A7MD48 611 aaKnown RBP2.94□□□□□ -1.94
NUP88-202ENST00000570937 SERPINE3A8MV23 424 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TMEM14DPA8MWL7 114 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 C12orf77C9JDV5 145 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TSC22D2O75157 780 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 RLN1P04808 185 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 CGB3P0DN86 165 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 CGB7P0DN87 165 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 CD36P16671 472 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 MDKP21741 143 aaPredicted RBP2.94□□□□□ -1.94
NUP88-202ENST00000570937 ZBTB25P24278 435 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 SSTR5P35346 364 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TALDO1P37837 337 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 KIR2DS4P43632 304 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 SERPINB10P48595 397 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 GNG10P50151 68 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 DLX1P56177 255 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 B2MP61769 119 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 HTD2P86397 168 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 PRB3Q04118 309 aaPredicted RBP2.94□□□□□ -1.94
NUP88-202ENST00000570937 HES1Q14469 280 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 KIR2DS1Q14954 304 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 P2RY14Q15391 338 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 SSX1Q16384 188 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 LY6EQ16553 131 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 LTC4SQ16873 150 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 C17orf58Q2M2W7 97 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 HLA-DRB5Q30154 266 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 LY6G6FQ5SQ64 297 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TPTE2P1Q5T6R2 138 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 HES5Q5TA89 166 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 C22orf42Q6IC83 251 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 TCF23Q7RTU1 214 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 LHFPL4Q7Z7J7 247 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 LYPD6Q86Y78 171 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 OR8H3Q8N146 312 aa2.94□□□□□ -1.94
NUP88-202ENST00000570937 GAPTQ8N292 157 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms