RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 NAGKQ9UJ70 344 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 NUPR1O60356 82 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 IGFBP2P18065 325 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 SELENOVP59797 346 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 SPCS3P61009 180 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 MRPS11P82912 194 aaKnown RBP12.73□□□□□ -0.37
USP43-202ENST00000570475 GABRA6Q16445 453 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 MLANAQ16655 118 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 INO80CQ6PI98 192 aaPredicted RBP12.73□□□□□ -0.37
USP43-202ENST00000570475 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 PQLC2Q6ZP29 291 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 PROCRQ9UNN8 238 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 TIMM9Q9Y5J7 89 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 APC2O95996 2303 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 HPRT1P00492 218 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 IRF2P14316 349 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 GNG4P50150 75 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 ZCCHC24Q8N2G6 241 aaKnown RBP12.73□□□□□ -0.37
USP43-202ENST00000570475 STPG3Q8N7X2 389 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 C9orf106Q8NAJ2 232 aa12.73□□□□□ -0.37
USP43-202ENST00000570475 RHOBP62745 196 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 TIGITQ495A1 244 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 TEPPQ6URK8 271 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 SIGLECL1Q8N7X8 197 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 ITLN1Q8WWA0 313 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 CCL13Q99616 98 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 SSBP3Q9BWW4 388 aaPredicted RBP12.72□□□□□ -0.37
USP43-202ENST00000570475 MRPL18Q9H0U6 180 aaKnown RBP12.72□□□□□ -0.37
USP43-202ENST00000570475 TMEM210A6NLX4 147 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 ENSAO43768 121 aaKnown RBP12.72□□□□□ -0.37
USP43-202ENST00000570475 CXorf1O96002 111 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 SRP14P37108 136 aaKnown RBP12.72□□□□□ -0.37
USP43-202ENST00000570475 ERVK11-1P61568 191 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 TEX38Q6PEX7 206 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 IGHV3-21A0A0B4J1V1 117 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 IQCF6A8MYZ5 107 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 GCGP01275 180 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 IL6RP08887 468 aaPredicted RBP12.72□□□□□ -0.37
USP43-202ENST00000570475 OR5G3P0C626 314 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 DUTP33316 252 aaKnown RBP12.72□□□□□ -0.37
USP43-202ENST00000570475 AMTP48728 403 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 HLA-DRB5Q30154 266 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 MIR17HGQ75NE6 70 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 ATOH7Q8N100 152 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 RNASE7Q9H1E1 156 aaKnown RBP12.72□□□□□ -0.37
USP43-202ENST00000570475 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
USP43-202ENST00000570475 CA1P00915 261 aaPredicted RBP12.71□□□□□ -0.37
USP43-202ENST00000570475 CA2P00918 260 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.37
USP43-202ENST00000570475 UTF1Q5T230 341 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 TIMP3P35625 211 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 TPPP2P59282 170 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 CCL8P80075 99 aa12.71□□□□□ -0.37
USP43-202ENST00000570475 HELTA6NFD8 242 aa12.71□□□□□ -0.38
USP43-202ENST00000570475 A6NNC1 897 aa12.71□□□□□ -0.38
USP43-202ENST00000570475 H0Y8G0 127 aa12.71□□□□□ -0.38
USP43-202ENST00000570475 GCHFRP30047 84 aa12.71□□□□□ -0.38
USP43-202ENST00000570475 DUX4L9Q6RFH8 374 aaPredicted RBP12.71□□□□□ -0.38
USP43-202ENST00000570475 Q6ZT83 130 aa12.71□□□□□ -0.38
USP43-202ENST00000570475 TGIF2LYQ8IUE0 185 aa12.71□□□□□ -0.38
USP43-202ENST00000570475 MGST2Q99735 147 aa12.71□□□□□ -0.38
USP43-202ENST00000570475 MGAQ8IWI9 3026 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 A8MWP6 167 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 J3QR06 171 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 TMPRSS2O15393 492 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 SERF1AO75920 110 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 ADH4P08319 380 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 OR10J1P30954 320 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 CAMPP49913 170 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 TAS2R60P59551 318 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 NDUFAF3Q9BU61 184 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 VAMP8Q9BV40 100 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 YTHDF2Q9Y5A9 579 aaKnown RBP12.7□□□□□ -0.38
USP43-202ENST00000570475 M0R143 59 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 ZNF253O75346 499 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 CCKARP32238 428 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 OR4S2Q8NH73 311 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 MORN2Q502X0 79 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 ZGRF1Q86YA3 2104 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 SARAFQ96BY9 339 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 TXN2Q99757 166 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 GGTLC1Q9BX51 225 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 KCNIP2Q9NS61 270 aa12.7□□□□□ -0.38
USP43-202ENST00000570475 TRGV10A0A0A0MS01 117 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 H3BTX0 84 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 RPL19P84098 196 aaKnown RBP12.69□□□□□ -0.38
USP43-202ENST00000570475 SNRNP40Q96DI7 357 aaKnown RBP12.69□□□□□ -0.38
USP43-202ENST00000570475 CLCF1Q9UBD9 225 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 NPIPB11E5RHQ5 1161 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 ZNF134P52741 427 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 RPEL1Q2QD12 228 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 SPRNQ5BIV9 151 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 ACTL10Q5JWF8 245 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 MMD2Q8IY49 270 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms