RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DUXBA0A1W2PPF3 345 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 C9orf170A2RU37 121 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 CRYM-AS1A6NIL9 109 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 C15orf61A6NNL5 157 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 C12orf77C9JDV5 145 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 NDUFS8O00217 210 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 RP2O75695 350 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 SFT2D2O95562 160 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 CD8AP01732 235 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 HBZP02008 142 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 GYPAP02724 150 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 RBP4P02753 201 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 SOD3P08294 240 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 SCTP09683 121 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 HLA-GP17693 338 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 CD34P28906 385 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 RBMXP38159 391 aaKnown RBP5.65□□□□□ -1.5
CNOT1-222ENST00000570139 RAB7AP51149 207 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 EDDM3BP56851 147 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 LINC00205P59089 165 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 ERVK-16P61578 105 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 DHRS2Q13268 280 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 EDDM3AQ14507 147 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 HERPUD1Q15011 391 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 SPRNQ5BIV9 151 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 ZCCHC24Q8N2G6 241 aaKnown RBP5.65□□□□□ -1.5
CNOT1-222ENST00000570139 C12orf45Q8N5I9 185 aaPredicted RBP5.65□□□□□ -1.5
CNOT1-222ENST00000570139 ZNRF1Q8ND25 227 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 IL1F10Q8WWZ1 152 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 TOMM40LQ969M1 308 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 CCL13Q99616 98 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 SLC2A9Q9NRM0 540 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 CALYQ9NYX4 217 aa5.65□□□□□ -1.5
CNOT1-222ENST00000570139 HIVEP3Q5T1R4 2406 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 IGKV1-6A0A0C4DH72 117 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 KBTBD11-OT1A0A1B0GTJ5 212 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 C15orf65H3BRN8 121 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 J3QKU1 62 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 BUB3O43684 328 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 YPEL1O60688 119 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 GIPP09681 153 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 AKR1C4P17516 323 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 NFYAP23511 347 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 PIGPP57054 158 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 FXYD4P59646 89 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 RPL31P62899 125 aaKnown RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 CYCSP99999 105 aaKnown RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 PPP1R1AQ13522 171 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 CIARTQ8N365 385 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 ZNF645Q8N7E2 425 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 FAM216BQ8N7L0 139 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 C8orf31Q8N9H6 132 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 DEFB108BQ8NET1 73 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 STXBP6Q8NFX7 210 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 OR8B3Q8NGG8 313 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 OR10V1Q8NGI7 309 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 OR4F5Q8NH21 305 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 MRGPRDQ8TDS7 321 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 PCNPQ8WW12 178 aaKnown RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 RTN4IP1Q8WWV3 396 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 IL22RA2Q969J5 263 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 ARL11Q969Q4 196 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 ZNF714Q96N38 554 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 YPEL2Q96QA6 119 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 OR8B2Q96RD0 313 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 CCL19Q99731 98 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 SEC22CQ9BRL7 303 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 TMEM246Q9BRR3 403 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 RTBDNQ9BSG5 229 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 RANBP3Q9H6Z4 567 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 NAA60Q9H7X0 242 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 PLEKHF2Q9H8W4 249 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 RAB18Q9NP72 206 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 CLN8Q9UBY8 286 aa5.64□□□□□ -1.51
CNOT1-222ENST00000570139 RBM7Q9Y580 266 aaKnown RBP5.64□□□□□ -1.51
CNOT1-222ENST00000570139 HRNRQ86YZ3 2850 aaPredicted RBP5.63□□□□□ -1.51
CNOT1-222ENST00000570139 DOPEY1Q5JWR5 2465 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 ZFYVE26Q68DK2 2539 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 A0A087WW49 117 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 H0Y980 276 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 ATG12O94817 140 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 IFNA21P01568 189 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 C1QBP02746 253 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 PET100P0DJ07 73 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 CGB3P0DN86 165 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 CGB7P0DN87 165 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 SSTR5P35346 364 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 CEACAM6P40199 344 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 GPR6P46095 362 aaPredicted RBP5.63□□□□□ -1.51
CNOT1-222ENST00000570139 BAMBIQ13145 260 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 CATR1Q13166 79 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 FCN2Q15485 313 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 ECSCRQ19T08 205 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 ZFP69Q49AA0 526 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 PRAMEF5Q5TYX0 476 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 FAM71F2Q6NXP2 309 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 BTNL3Q6UXE8 466 aa5.63□□□□□ -1.51
CNOT1-222ENST00000570139 HEPN1Q6WQI6 88 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms