RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MARCH11A6NNE9 402 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 H3BMQ9 156 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 OR2J3O76001 311 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 CD3DP04234 171 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 CRYGCP07315 174 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 FGF2P09038 288 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 RPA2P15927 270 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 TBPP20226 339 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 LPAR6P43657 344 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 OR2B8PP59922 312 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 EXOSC2Q13868 293 aaKnown RBP9.99□□□□□ -0.81
CNOT1-220ENST00000569916 RNASE10Q5GAN6 216 aaKnown RBP9.99□□□□□ -0.81
CNOT1-220ENST00000569916 DEFB121Q5J5C9 76 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 LPCAT3Q6P1A2 487 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 LHFPL1Q86WI0 220 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 NECAP1Q8NC96 275 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 DMBX1Q8NFW5 382 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 ISOC1Q96CN7 298 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 PEF1Q9UBV8 284 aaKnown RBP9.99□□□□□ -0.81
CNOT1-220ENST00000569916 ZNF256Q9Y2P7 627 aaPredicted RBP9.99□□□□□ -0.81
CNOT1-220ENST00000569916 DNAH9Q9NYC9 4486 aa9.99□□□□□ -0.81
CNOT1-220ENST00000569916 DPPA5A6NC42 116 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 GABARAPH6UMI1 98 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 NOL3O60936 208 aaKnown RBP9.98□□□□□ -0.81
CNOT1-220ENST00000569916 CD74P04233 296 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 CTRB1P17538 263 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 PSMB6P28072 239 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 ERVK-16P61578 105 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 ATP5G2Q06055 141 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 KLF5Q13887 457 aaPredicted RBP9.98□□□□□ -0.81
CNOT1-220ENST00000569916 KLK9Q2XQG4 91 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 CTRB2Q6GPI1 263 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 TBC1D26Q86UD7 250 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 SLC38A6Q8IZM9 456 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 ARRDC1Q8N5I2 433 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 SLIRPQ9GZT3 109 aaKnown RBP9.98□□□□□ -0.81
CNOT1-220ENST00000569916 KLK9Q9UKQ9 250 aa9.98□□□□□ -0.81
CNOT1-220ENST00000569916 IGLC7A0M8Q6 106 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 BMPR1BO00238 502 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 KRASP01116 189 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 IFNA6P05013 189 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 REG1AP05451 166 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 S100GP29377 79 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 G6PCP35575 357 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 MRPS10P82664 201 aaKnown RBP9.97□□□□□ -0.81
CNOT1-220ENST00000569916 DCTN2Q13561 401 aaKnown RBP9.97□□□□□ -0.81
CNOT1-220ENST00000569916 C15orf32Q32M92 178 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 CADM3Q8N126 398 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 TMEM229BQ8NBD8 167 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 OR4D10Q8NGI6 311 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 SMIM4Q8WVI0 70 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 COMMD5Q9GZQ3 224 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
CNOT1-220ENST00000569916 LSM4Q9Y4Z0 139 aaKnown RBP9.97□□□□□ -0.81
CNOT1-220ENST00000569916 CEPT1Q9Y6K0 416 aa9.97□□□□□ -0.81
CNOT1-220ENST00000569916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.96□□□□□ -0.82
CNOT1-220ENST00000569916 CTDSPLO15194 276 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 TAS2R19P59542 299 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 RND3P61587 244 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 SSBP1Q04837 148 aaKnown RBP9.96□□□□□ -0.82
CNOT1-220ENST00000569916 HAPLN4Q86UW8 402 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 OR6Q1Q8NGQ2 317 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 ZNF486Q96H40 463 aaPredicted RBP9.96□□□□□ -0.82
CNOT1-220ENST00000569916 DIRAS2Q96HU8 199 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 OR4C12Q96R67 309 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 SRSF8Q9BRL6 282 aaKnown RBP9.96□□□□□ -0.82
CNOT1-220ENST00000569916 ELOVL1Q9BW60 279 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 QTRT1Q9BXR0 403 aaKnown RBP9.96□□□□□ -0.82
CNOT1-220ENST00000569916 C6orf62Q9GZU0 229 aaPredicted RBP9.96□□□□□ -0.82
CNOT1-220ENST00000569916 FBXL7Q9UJT9 491 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 DMRT1Q9Y5R6 373 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 COL7A1Q02388 2944 aa9.96□□□□□ -0.82
CNOT1-220ENST00000569916 IGLV11-55A0A075B6I3 123 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 TEX50A0A1B0GTY4 177 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 NDUFB8O95169 186 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 LY86O95711 162 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 RAB3DO95716 219 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 DHFRP00374 187 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 IGKV1-39P01597 117 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 IGLV1-51P01701 117 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 IGKV1D-39P04432 117 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 PGAM2P15259 253 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 SPNP16150 400 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 HIST1H1BP16401 226 aaKnown RBP9.95□□□□□ -0.82
CNOT1-220ENST00000569916 PI3P19957 117 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 PTBP1P26599 531 aaKnown RBP eCLIP9.95□□□□□ -0.82
CNOT1-220ENST00000569916 PPP5CP53041 499 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 IL18Q14116 193 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 RPEL1Q2QD12 228 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 THOC7Q6I9Y2 204 aaKnown RBP9.95□□□□□ -0.82
CNOT1-220ENST00000569916 STEAP1BQ6NZ63 245 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 IL34Q6ZMJ4 242 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 OR10W1Q8NGF6 305 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 OR9G4Q8NGQ1 327 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 MRGPRFQ96AM1 343 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 CCDC140Q96MF4 163 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 B9D2Q9BPU9 175 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 NXF2Q9GZY0 626 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms