RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 RPA2P15927 270 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 PPP5CP53041 499 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 RND3P61587 244 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 KIAA0141Q14154 515 aaPredicted RBP7.61□□□□□ -1.19
CLN6-209ENST00000569336 SCGB2B2Q4G0G5 96 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 C10orf55Q5SWW7 151 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 C9orf66Q5T8R8 295 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 ASPHD1Q5U4P2 390 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 FOXB2Q5VYV0 432 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 TBC1D26Q86UD7 250 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 LHFPL1Q86WI0 220 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 CADM3Q8N126 398 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 TERB2Q8NHR7 220 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 ZFAND1Q8TCF1 268 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 FYTTD1Q96QD9 318 aaKnown RBP7.61□□□□□ -1.19
CLN6-209ENST00000569336 TSC22D3Q99576 134 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 PRRT1Q99946 306 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 SRSF8Q9BRL6 282 aaKnown RBP7.61□□□□□ -1.19
CLN6-209ENST00000569336 NPIPB5A8MRT5 1133 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 SEC14L6B5MCN3 397 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 B3GALNT1O75752 331 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 SNAPC5O75971 98 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 ATG12O94817 140 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 IGHV3-11P01762 117 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 HSPB1P04792 205 aaKnown RBP7.6□□□□□ -1.19
CLN6-209ENST00000569336 SERPINE2P07093 398 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 ZP3P21754 424 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 TNFSF8P32971 234 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 FAUP35544 74 aaKnown RBP7.6□□□□□ -1.19
CLN6-209ENST00000569336 LPAR6P43657 344 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 INSL3P51460 131 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 SURF2Q15527 256 aaPredicted RBP7.6□□□□□ -1.19
CLN6-209ENST00000569336 HSD17B13Q7Z5P4 300 aaPredicted RBP7.6□□□□□ -1.19
CLN6-209ENST00000569336 TTC9CQ8N5M4 171 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 NECAP1Q8NC96 275 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 QTRT1Q9BXR0 403 aaKnown RBP7.6□□□□□ -1.19
CLN6-209ENST00000569336 RANGRFQ9HD47 186 aaPredicted RBP7.6□□□□□ -1.19
CLN6-209ENST00000569336 NDUFA13Q9P0J0 144 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 COPZ2Q9P299 210 aa7.6□□□□□ -1.19
CLN6-209ENST00000569336 C14orf166Q9Y224 244 aaKnown RBP7.6□□□□□ -1.19
CLN6-209ENST00000569336 NBEAL2Q6ZNJ1 2754 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 IGHV4OR15-8A0A075B7B6 117 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 A0A087WW49 117 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 ANKRD20A5PA0PJZ0 165 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 TEX22C9J3V5 150 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 H0Y980 276 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 UPK2O00526 184 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 OVOL1O14753 267 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 KRASP01116 189 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 HIST1H1BP16401 226 aaKnown RBP7.59□□□□□ -1.19
CLN6-209ENST00000569336 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLN6-209ENST00000569336 PIGPP57054 158 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 AP3S2P59780 193 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 RHOGP84095 191 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 EGFEM1PQ0D2K5 195 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 DCTN2Q13561 401 aaKnown RBP7.59□□□□□ -1.19
CLN6-209ENST00000569336 SPANXN2Q5MJ10 180 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 OR4D10Q8NGI6 311 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 OR4C16Q8NGL9 310 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 ALX4Q9H161 411 aaPredicted RBP7.59□□□□□ -1.19
CLN6-209ENST00000569336 FKBP11Q9NYL4 201 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 SCP2D1Q9UJQ7 156 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 PRNDQ9UKY0 176 aa7.59□□□□□ -1.19
CLN6-209ENST00000569336 TRBV9A0A0B4J1U6 114 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 HMX3A6NHT5 357 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 CTSDP07339 412 aaPredicted RBP7.58□□□□□ -1.2
CLN6-209ENST00000569336 IL6RP08887 468 aaPredicted RBP7.58□□□□□ -1.2
CLN6-209ENST00000569336 DEFA4P12838 97 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 PSMB6P28072 239 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 G6PCP35575 357 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 AKR1C2P52895 323 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 SLURP1P55000 103 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 OR2B8PP59922 312 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 ATP5G2Q06055 141 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 EXOSC2Q13868 293 aaKnown RBP7.58□□□□□ -1.2
CLN6-209ENST00000569336 ZNF585BQ52M93 769 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 PYDC2Q56P42 97 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 ZNF343Q6P1L6 599 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 H2BFWTQ7Z2G1 175 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 Q8N402 240 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 OR1L8Q8NGR8 309 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 OR13C8Q8NGS7 320 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 OR5B3Q8NH48 314 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 MARCH1Q8TCQ1 289 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 DEDD2Q8WXF8 326 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 TMEM56Q96MV1 263 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 SCGB3A2Q96PL1 93 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 AURKAIP1Q9NWT8 199 aaPredicted RBP7.58□□□□□ -1.2
CLN6-209ENST00000569336 SLC2A8Q9NY64 477 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 THYN1Q9P016 225 aa7.58□□□□□ -1.2
CLN6-209ENST00000569336 PEF1Q9UBV8 284 aaKnown RBP7.58□□□□□ -1.2
CLN6-209ENST00000569336 C3orf85A0A1B0GTC6 90 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 IGLC7A0M8Q6 106 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 C15orf61A6NNL5 157 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 CRYGCP07315 174 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 TRAPPC2P0DI81 140 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 TRAPPC2BP0DI82 140 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 AREGP15514 252 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 CTRB1P17538 263 aa7.57□□□□□ -1.2
CLN6-209ENST00000569336 PI3P19957 117 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms