RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 OR11H1Q8NG94 326 aa10.09□□□□□ -0.79
CNOT1-213ENST00000568158 OR4A5Q8NH83 315 aa10.09□□□□□ -0.79
CNOT1-213ENST00000568158 C4orf3Q8WVX3 66 aa10.09□□□□□ -0.79
CNOT1-213ENST00000568158 ZNF486Q96H40 463 aaPredicted RBP10.09□□□□□ -0.79
CNOT1-213ENST00000568158 TMEM140Q9NV12 185 aa10.09□□□□□ -0.79
CNOT1-213ENST00000568158 COMMD9Q9P000 198 aa10.09□□□□□ -0.79
CNOT1-213ENST00000568158 GPR132Q9UNW8 380 aa10.09□□□□□ -0.79
CNOT1-213ENST00000568158 NSG2Q9Y328 171 aa10.09□□□□□ -0.79
CNOT1-213ENST00000568158 RBMXL2O75526 392 aaKnown RBP10.08□□□□□ -0.8
CNOT1-213ENST00000568158 PRH1P02810 166 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 CTSDP07339 412 aaPredicted RBP10.08□□□□□ -0.8
CNOT1-213ENST00000568158 OR9G9P0C7N8 305 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 HLA-GP17693 338 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 SLC6A1P30531 599 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 ERVK-16P61578 105 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 KLF9Q13886 244 aaPredicted RBP10.08□□□□□ -0.8
CNOT1-213ENST00000568158 SPANXN2Q5MJ10 180 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 C19orf35Q6ZS72 473 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 TOMM5Q8N4H5 51 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 TTC9CQ8N5M4 171 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 ADAD2Q8NCV1 583 aaKnown RBP10.08□□□□□ -0.8
CNOT1-213ENST00000568158 OR1N2Q8NGR9 330 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 TRIM63Q969Q1 353 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 TP53RKQ96S44 253 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 SPIN2AQ99865 258 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 SPIN2BQ9BPZ2 258 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 SRRQ9GZT4 340 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 FAM212BQ9NTI7 297 aaPredicted RBP10.08□□□□□ -0.8
CNOT1-213ENST00000568158 MCUBQ9NWR8 336 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 COA4Q9NYJ1 87 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 COPZ2Q9P299 210 aa10.08□□□□□ -0.8
CNOT1-213ENST00000568158 C3orf85A0A1B0GTC6 90 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 TEX50A0A1B0GTY4 177 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 MARCH11A6NNE9 402 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 RAB25P57735 213 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 OR2B8PP59922 312 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 BAK1Q16611 211 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 SEC22AQ96IW7 307 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 SDHCQ99643 169 aaPredicted RBP10.07□□□□□ -0.8
CNOT1-213ENST00000568158 PRRT1Q99946 306 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 C5orf66Q9H5L9 145 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 SLA2Q9H6Q3 261 aa10.07□□□□□ -0.8
CNOT1-213ENST00000568158 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 H3BUA1 57 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 REG1AP05451 166 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 SERPINE2P07093 398 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 AREGP15514 252 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 RUNX1Q01196 453 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 DEFA6Q01524 100 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 ZNF45Q02386 682 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 IZUMO4Q1ZYL8 232 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 CCDC71LQ8N9Z2 235 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 OR10W1Q8NGF6 305 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 DPF1Q92782 380 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 COMMD5Q9GZQ3 224 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 SLC2A8Q9NY64 477 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 SCP2D1Q9UJQ7 156 aa10.06□□□□□ -0.8
CNOT1-213ENST00000568158 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
CNOT1-213ENST00000568158 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 A0A087WW49 117 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 TEX13DA0A0J9YY54 714 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-213ENST00000568158 C13orf42A0A1B0GVH6 325 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 ANKRD34BA5PLL1 514 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 DBX1A6NMT0 343 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 H0Y980 276 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 SNAPC5O75971 98 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 BRI3O95415 125 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
CNOT1-213ENST00000568158 ECI1P42126 302 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 SURF2Q15527 256 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-213ENST00000568158 CNPY1Q3B7I2 92 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 ZNF57Q68EA5 555 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-213ENST00000568158 H2BFWTQ7Z2G1 175 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 GDPD1Q8N9F7 314 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 AKIP1Q9NQ31 210 aa10.05□□□□□ -0.8
CNOT1-213ENST00000568158 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 A0A0G2JLM5 398 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 LINC00854A0A1B0GVQ3 168 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 OR2J3O76001 311 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
CNOT1-213ENST00000568158 CRYGCP07315 174 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 OR5AC1P0C628 307 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 TRAPPC2P0DI81 140 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 TRAPPC2BP0DI82 140 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 CTRB1P17538 263 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 PSMB6P28072 239 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 SLURP1P55000 103 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 AP3S2P59780 193 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 ZNF616Q08AN1 781 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 FHL3Q13643 280 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 TRIM16LQ309B1 348 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 BEAN1Q3B7T3 259 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 CTRB2Q6GPI1 263 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 SLC25A42Q86VD7 318 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 CADM3Q8N126 398 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 OR1L8Q8NGR8 309 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 GLYATL2Q8WU03 294 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 DCUN1D4Q92564 292 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms