RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	SVIL	O95425	2214 aa		4.01	□□□□□ -1.77
CBFB-208	ENST00000567947	TEX15	Q9BXT5	2789 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	ICE1	Q9Y2F5	2266 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	IGKV1-8	A0A0C4DH67	115 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	LOC102725191	A0A1B0GVB3	256 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	MEIS3P1	A6NDR6	274 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947		J3QKU1	62 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	DEGS1	O15121	323 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	HCRTR1	O43613	425 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	NDUFS7	O75251	213 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	S1PR2	O95136	353 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	MT-CO2	P00403	227 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	CGA	P01215	116 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	IFNA5	P01569	189 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	HPN	P05981	417 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	GPX1	P07203	203 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	SMIM10L1	P0DMW3	83 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	GNB3	P16520	340 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	KLK2	P20151	261 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	LGALS7	P47929	136 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	DNASE1L1	P49184	302 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	GPM6A	P51674	278 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	HILS1	P60008	231 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	PPP1CA	P62136	330 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	PPP1CB	P62140	327 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	RPL23	P62829	140 aa	Known RBP	4	□□□□□ -1.77
CBFB-208	ENST00000567947	MEF2B	Q02080	365 aa	Predicted RBP	4	□□□□□ -1.77
CBFB-208	ENST00000567947	P2RY6	Q15077	328 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	SPATA45	Q537H7	98 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	WDR38	Q5JTN6	314 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	SPIN3	Q5JUX0	258 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	FIGLA	Q6QHK4	219 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	RASL11A	Q6T310	242 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	PLXDC2	Q6UX71	529 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	ASCL4	Q6XD76	172 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947		Q6ZS92	163 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	NEGR1	Q7Z3B1	354 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	TBC1D26	Q86UD7	250 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4	□□□□□ -1.77
CBFB-208	ENST00000567947	C17orf78	Q8N4C9	275 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	ZIC4	Q8N9L1	334 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	GJC3	Q8NFK1	279 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	OR10P1	Q8NGE3	313 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	OR5D14	Q8NGL3	314 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	OR10G8	Q8NGN5	311 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	OR11L1	Q8NGX0	322 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	SLC25A40	Q8TBP6	338 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	NT5C	Q8TCD5	201 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	FAM222B	Q8WU58	562 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	TMEM37	Q8WXS4	190 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	OR5P3	Q8WZ94	311 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	DYRK2	Q92630	601 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	SLC25A44	Q96H78	314 aa	Predicted RBP	4	□□□□□ -1.77
CBFB-208	ENST00000567947	SFRP2	Q96HF1	295 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	SMIM10	Q96HG1	83 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	SIGMAR1	Q99720	223 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	ATP5S	Q99766	215 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	LMF2	Q9BU23	707 aa	Known RBP	4	□□□□□ -1.77
CBFB-208	ENST00000567947	GNB1L	Q9BYB4	327 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	NAA60	Q9H7X0	242 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	FAM60A	Q9NP50	221 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	EHF	Q9NZC4	300 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	KLHDC2	Q9Y2U9	406 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	MRPS2	Q9Y399	296 aa	Known RBP	4	□□□□□ -1.77
CBFB-208	ENST00000567947	RNF115	Q9Y4L5	304 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	MRPS18B	Q9Y676	258 aa	Known RBP	4	□□□□□ -1.77
CBFB-208	ENST00000567947	SCN3A	Q9NY46	2000 aa		4	□□□□□ -1.77
CBFB-208	ENST00000567947	TRAV9-2	A0A087WT02	112 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	IGKV3D-11	A0A0A0MRZ8	115 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	TMEM150C	B9EJG8	249 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	P2RY10	O00398	339 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	MLNR	O43193	412 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	ZNF207	O43670	478 aa	Known RBP	3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	PDE6D	O43924	150 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	ZIC3	O60481	467 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	LINC00869	P0C866	280 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	IGLC1	P0CG04	106 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	CRISP2	P16562	243 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	FUT1	P19526	365 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	KITLG	P21583	273 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	HIST1H1T	P22492	207 aa	Predicted RBP	3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	IL3RA	P26951	378 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	TIMP3	P35625	211 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	TFPI2	P48307	235 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	PSMB3	P49720	205 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	ZNF133	P52736	654 aa	Predicted RBP	3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	PIGP	P57054	158 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	DCAF7	P61962	342 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	GNB2	P62879	340 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	CCL20	P78556	96 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	SRSF6	Q13247	344 aa	Known RBP	3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	TMEM187	Q14656	261 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	RNPS1	Q15287	305 aa	Known RBP	3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	ADIRF	Q15847	76 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	BATF	Q16520	125 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	SLC22A6	Q4U2R8	563 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	MRPL2	Q5T653	305 aa	Known RBP	3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	C1orf140	Q5VVS0	124 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	ZNF880	Q6PDB4	577 aa		3.99	□□□□□ -1.77
CBFB-208	ENST00000567947	CALHM1	Q8IU99	346 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms