RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 DUSP13Q9UII6 198 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 A0A0G2JNJ9 132 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 A0A1W2PPQ1 181 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 XKRY2A2RUG3 117 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 TSTD3H0UI37 97 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 LHBP01229 141 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 AMBPP02760 352 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 RPS16P62249 146 aaKnown RBP13.82□□□□□ -0.2
CMTM3-213ENST00000566756 C9orf152Q5JTZ5 239 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 TMEM144Q7Z5S9 345 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 LINC00469Q8N7U9 141 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 NPVFQ9HCQ7 196 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 Q9UFV3 132 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 LSM4Q9Y4Z0 139 aaKnown RBP13.82□□□□□ -0.2
CMTM3-213ENST00000566756 GAMTQ14353 236 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 ADTRPQ96IZ2 230 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 MGST2Q99735 147 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 TMEM140Q9NV12 185 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 CALYQ9NYX4 217 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 TCF19Q9Y242 345 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 PXMP4Q9Y6I8 212 aa13.82□□□□□ -0.2
CMTM3-213ENST00000566756 TRAV38-1A0A0B4J264 116 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 C15orf61A6NNL5 157 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 RRHO14718 337 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 GCGP01275 180 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 PLA2G5P39877 138 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 EDDM3BP56851 147 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 KLRB1Q12918 225 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 POU2AF1Q16633 256 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 TMEM30BQ3MIR4 351 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 PRR30Q53SZ7 412 aaPredicted RBP13.81□□□□□ -0.2
CMTM3-213ENST00000566756 MEGF10Q96KG7 1140 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 MS4A5Q9H3V2 200 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 ELOVL5Q9NYP7 299 aa13.81□□□□□ -0.2
CMTM3-213ENST00000566756 FOXA2Q9Y261 457 aaPredicted RBP13.81□□□□□ -0.2
CMTM3-213ENST00000566756 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 GLRXP35754 106 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 GATA4P43694 442 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 ATP5G3P48201 142 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 THBS3P49746 956 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 FAM222BQ8WU58 562 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 JKAMPQ9P055 326 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 TRAV9-1A0A075B6T8 112 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 BMP5P22003 454 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 GPX4P36969 197 aaPredicted RBP13.8□□□□□ -0.2
CMTM3-213ENST00000566756 ZNF134P52741 427 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 LTC4SQ16873 150 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 RPL39P5Q59GN2 51 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 GCSAMLQ5JQS6 135 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 CST9LP1Q5W188 147 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 ARL2-SNX15V9GYD0 113 aa13.8□□□□□ -0.2
CMTM3-213ENST00000566756 NDUFB4O95168 129 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 CCKARP32238 428 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 RAB31Q13636 194 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 CORO2AQ92828 525 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 OR2V2Q96R30 315 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 TMEM14BQ9NUH8 114 aa13.79□□□□□ -0.2
CMTM3-213ENST00000566756 IGLV3-9A0A075B6K5 115 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 MT-CO2P00403 227 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 RD3LP0DJH9 198 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 GZMBP10144 247 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 DEFA4P12838 97 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 IL3RAP26951 378 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 RPL29P47914 159 aaKnown RBP13.78□□□□□ -0.2
CMTM3-213ENST00000566756 ATP5IP56385 69 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-213ENST00000566756 KLF3P57682 345 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-213ENST00000566756 RPL15P61313 204 aaKnown RBP13.78□□□□□ -0.2
CMTM3-213ENST00000566756 HSPE1P61604 102 aaKnown RBP13.78□□□□□ -0.2
CMTM3-213ENST00000566756 MSMPQ1L6U9 139 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 C17orf58Q2M2W7 97 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 REC114Q7Z4M0 266 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 TMEM18Q96B42 140 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 FUT9Q9Y231 359 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 LY96Q9Y6Y9 160 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 DOCK11Q5JSL3 2073 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 DDTP30046 118 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 CNN1P51911 297 aaKnown RBP13.78□□□□□ -0.2
CMTM3-213ENST00000566756 FAM27E3Q08E93 113 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 TEPPQ6URK8 271 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 SDSLQ96GA7 329 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 SFRP2Q96HF1 295 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 VKORC1Q9BQB6 163 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 LINC00574Q9H8X3 128 aa13.78□□□□□ -0.2
CMTM3-213ENST00000566756 PATZ1Q9HBE1 687 aaKnown RBP13.78□□□□□ -0.2
CMTM3-213ENST00000566756 DIDO1Q9BTC0 2240 aaKnown RBP13.77□□□□□ -0.2
CMTM3-213ENST00000566756 CACNA1DQ01668 2161 aa13.77□□□□□ -0.2
CMTM3-213ENST00000566756 KBTBD11-OT1A0A1B0GTJ5 212 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 MDFIC2A0A1B0GVS7 189 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 CRYAAP02489 173 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 NPY1RP25929 384 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 CHRNA7P36544 502 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 UBE2G2P60604 165 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 RHOBP62745 196 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 FAM78BQ5VT40 261 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 MIC13Q5XKP0 118 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms