RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PIGBOS1A0A0B4J2F0 54 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 A0A1B0GUS0 222 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 C9orf170A2RU37 121 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 TMEM89A2RUT3 159 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 UPK2O00526 184 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 OR9G9P0C7N8 305 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 HLA-GP17693 338 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 OR2B8PP59922 312 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 SSBP2P81877 361 aaPredicted RBP9.05□□□□□ -0.96
KARS-207ENST00000566560 FXYD3Q14802 87 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 ECSCRQ19T08 205 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 MRGPRG-AS1Q2M3A8 158 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 ANKRD55Q3KP44 614 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 AWAT1Q58HT5 328 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 C10orf55Q5SWW7 151 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 CDPF1Q6NVV7 123 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 ZNF562Q6V9R5 426 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 SELENOHQ8IZQ5 122 aaKnown RBP9.05□□□□□ -0.96
KARS-207ENST00000566560 DUSP18Q8NEJ0 188 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 SRSF12Q8WXF0 261 aaKnown RBP9.05□□□□□ -0.96
KARS-207ENST00000566560 RRNAD1Q96FB5 475 aaKnown RBP9.05□□□□□ -0.96
KARS-207ENST00000566560 TMEM56Q96MV1 263 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 NOL4LQ96MY1 436 aaPredicted RBP9.05□□□□□ -0.96
KARS-207ENST00000566560 FAM103A1Q9BTL3 118 aaKnown RBP9.05□□□□□ -0.96
KARS-207ENST00000566560 SERTAD4Q9NUC0 356 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 MMP24Q9Y5R2 645 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 TMEM56-RWDD3S4R434 201 aa9.05□□□□□ -0.96
KARS-207ENST00000566560 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
KARS-207ENST00000566560 A0A0B4J2A0 478 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 C15orf61A6NNL5 157 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 RBMXL2O75526 392 aaKnown RBP9.04□□□□□ -0.96
KARS-207ENST00000566560 SNAPC5O75971 98 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 H2AFB1P0C5Y9 115 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 P0C879 139 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 SPNP16150 400 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 VDAC1P21796 283 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 MAS1LP35410 378 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 COMPP49747 757 aaPredicted RBP9.04□□□□□ -0.96
KARS-207ENST00000566560 MECP2P51608 486 aaKnown RBP9.04□□□□□ -0.96
KARS-207ENST00000566560 RGS21Q2M5E4 152 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 FAM219AQ8IW50 185 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 STPG2Q8N412 459 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 KLHDC1Q8N7A1 406 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 OR52B4Q8NGK2 314 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 COQ8AQ8NI60 647 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 PHB2Q99623 299 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 SEC22CQ9BRL7 303 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 ALX4Q9H161 411 aaPredicted RBP9.04□□□□□ -0.96
KARS-207ENST00000566560 SHPKQ9UHJ6 478 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 LINC00527Q9UJ94 153 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 NSG2Q9Y328 171 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 FBXO7Q9Y3I1 522 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 COL6A5A8TX70 2615 aa9.04□□□□□ -0.96
KARS-207ENST00000566560 TRAV41A0A0B4J266 112 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 A0A0G2JRQ6 117 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 DUXBA0A1W2PPF3 345 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 INMT-MINDY4F8WBC2 141 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 DUS4LO95620 317 aaKnown RBP9.03□□□□□ -0.96
KARS-207ENST00000566560 OPN1MWP04001 364 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 IGF1P05019 195 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 IL6RP08887 468 aaPredicted RBP9.03□□□□□ -0.96
KARS-207ENST00000566560 FGF2P09038 288 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 OPN1MW2P0DN77 364 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 OPN1MW3P0DN78 364 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 MYOD1P15172 320 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 RPL27AP46776 148 aaKnown RBP9.03□□□□□ -0.96
KARS-207ENST00000566560 PROK1P58294 105 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 IZUMO4Q1ZYL8 232 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 CADM3Q8N126 398 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 LRTM2Q8N967 370 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 OR4A16Q8NH70 328 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 SGMS2Q8NHU3 365 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 CHPT1Q8WUD6 406 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 COMMD5Q9GZQ3 224 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 CACNG5Q9UF02 275 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 ZNF580Q9UK33 172 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 PRNDQ9UKY0 176 aa9.03□□□□□ -0.96
KARS-207ENST00000566560 PSMB11A5LHX3 300 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 PRAF2O60831 178 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 IL5P05113 134 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 CRIP2P52943 208 aaPredicted RBP9.02□□□□□ -0.97
KARS-207ENST00000566560 SLC35B1P78383 322 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 NMSQ5H8A3 153 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 UNQ5815/PRO19632Q6UWF5 114 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 LYZL2Q7Z4W2 148 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 ZNF431Q8TF32 576 aaPredicted RBP9.02□□□□□ -0.97
KARS-207ENST00000566560 MITD1Q8WV92 249 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 LSM10Q969L4 123 aaKnown RBP9.02□□□□□ -0.97
KARS-207ENST00000566560 FYTTD1Q96QD9 318 aaKnown RBP9.02□□□□□ -0.97
KARS-207ENST00000566560 SPIN2AQ99865 258 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 SPIN2BQ9BPZ2 258 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 MARVELD1Q9BSK0 173 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 GON7Q9BXV9 100 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 GPN1Q9HCN4 374 aaPredicted RBP9.02□□□□□ -0.97
KARS-207ENST00000566560 TMEM14BQ9NUH8 114 aa9.02□□□□□ -0.97
KARS-207ENST00000566560 FOXA2Q9Y261 457 aaPredicted RBP9.02□□□□□ -0.97
KARS-207ENST00000566560 OR51B2Q9Y5P1 312 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms