RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TMEM200BQ69YZ2 307 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 SLC24A4Q8NFF2 622 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 RNASE6Q93091 150 aaKnown RBP15.31■□□□□ 0.04
MSLN-207ENST00000566549 ADTRPQ96IZ2 230 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 ZNF714Q96N38 554 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 C12orf57Q99622 126 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 GAL3ST2Q9H3Q3 398 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 LINC00574Q9H8X3 128 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 FOXA2Q9Y261 457 aaPredicted RBP15.31■□□□□ 0.04
MSLN-207ENST00000566549 TANC2Q9HCD6 1990 aa15.3■□□□□ 0.04
MSLN-207ENST00000566549 SHISA9B4DS77 424 aa15.3■□□□□ 0.04
MSLN-207ENST00000566549 YIF1AO95070 293 aa15.3■□□□□ 0.04
MSLN-207ENST00000566549 HRASP01112 189 aa15.3■□□□□ 0.04
MSLN-207ENST00000566549 DMRTC2Q8IXT2 367 aaPredicted RBP15.3■□□□□ 0.04
MSLN-207ENST00000566549 C1orf87Q8N0U7 546 aa15.3■□□□□ 0.04
MSLN-207ENST00000566549 FAM122AQ96E09 287 aa15.3■□□□□ 0.04
MSLN-207ENST00000566549 MALSU1Q96EH3 234 aa15.3■□□□□ 0.04
MSLN-207ENST00000566549 COL25A1Q9BXS0 654 aaPredicted RBP15.3■□□□□ 0.04
MSLN-207ENST00000566549 MRPL20Q9BYC9 149 aaKnown RBP15.3■□□□□ 0.04
MSLN-207ENST00000566549 A0A1W2PPV4 95 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 ZNF98A6NK75 572 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 MAS1LP35410 378 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 RBPJQ06330 500 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 PNRC1Q12796 327 aaPredicted RBP15.29■□□□□ 0.04
MSLN-207ENST00000566549 ARSJQ5FYB0 599 aaPredicted RBP15.29■□□□□ 0.04
MSLN-207ENST00000566549 PARLQ9H300 379 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 SIRT7Q9NRC8 400 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 ZZEF1O43149 2961 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 RTL8BQ17RB0 113 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 GGTLC1Q9BX51 225 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 PXMP4Q9Y6I8 212 aa15.29■□□□□ 0.04
MSLN-207ENST00000566549 B4DEV8 164 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 J3QR06 171 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 LY86O95711 162 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 KIAA0141Q14154 515 aaPredicted RBP15.28■□□□□ 0.04
MSLN-207ENST00000566549 C1orf159Q96HA4 380 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 MANBALQ9NQG1 85 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 CTSZQ9UBR2 303 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 C11orf94C9JXX5 98 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 DIAPH2-AS1Q14236 149 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 LINC01560Q8TB33 94 aa15.28■□□□□ 0.04
MSLN-207ENST00000566549 CXorf65A6NEN9 183 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 FAM90A27PA6NNH2 459 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 VSTM5A8MXK1 200 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 NDUFB3O43676 98 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 PLAUP00749 431 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 SAA1P0DJI8 122 aaPredicted RBP15.27■□□□□ 0.04
MSLN-207ENST00000566549 PMS2P11Q13670 270 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 OR5T1Q8NG75 326 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 OR51G1Q8NGK1 321 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 NAT8Q9UHE5 227 aa15.27■□□□□ 0.04
MSLN-207ENST00000566549 DVL1O14640 695 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 KBTBD11O94819 623 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 OPRK1P41145 380 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 TMEM241Q24JQ0 296 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 CST9LP1Q5W188 147 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 MOB3BQ86TA1 216 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 NECAP1Q8NC96 275 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 TMEM204Q9BSN7 226 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 GGACTQ9BVM4 153 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 PLEKHA3Q9HB20 300 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 NPVFQ9HCQ7 196 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 NGBQ9NPG2 151 aa15.27■□□□□ 0.03
MSLN-207ENST00000566549 CLDN34H7C241 214 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 UBE2CO00762 179 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 MPDU1O75352 247 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 GRNP28799 593 aaKnown RBP15.26■□□□□ 0.03
MSLN-207ENST00000566549 ATP5G3P48201 142 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 MEF2CQ06413 473 aaPredicted RBP15.26■□□□□ 0.03
MSLN-207ENST00000566549 LRRC10Q5BKY1 277 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 NCMAPQ5T1S8 102 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 PRNDQ9UKY0 176 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.26■□□□□ 0.03
MSLN-207ENST00000566549 SEC14L6B5MCN3 397 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 UPK2O00526 184 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 SOX15O60248 233 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 TMPRSS3P57727 454 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 B2MP61769 119 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 CYP2G1PQ6ZSU1 146 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 OR10X1Q8NGY0 326 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 HARBI1Q96MB7 349 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 VKORC1Q9BQB6 163 aa15.26■□□□□ 0.03
MSLN-207ENST00000566549 LYNX1G3V0Z9 82 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 TMEM250H0YL14 139 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 ARL14EPLP0DKL9 152 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 LYNX1P0DP58 116 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 CHRNB4P30926 498 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 PRB3Q04118 309 aaPredicted RBP15.25■□□□□ 0.03
MSLN-207ENST00000566549 ZNF833PQ6ZTB9 187 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 ABHD5Q8WTS1 349 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 RAXQ9Y2V3 346 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 NBASA2RRP1 2371 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 IGHV2-5P01817 119 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 IL6RP08887 468 aaPredicted RBP15.25■□□□□ 0.03
MSLN-207ENST00000566549 MEOX2P50222 304 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 RPL23P62829 140 aaKnown RBP15.25■□□□□ 0.03
MSLN-207ENST00000566549 POU2AF1Q16633 256 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 TEPPQ6URK8 271 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 OR10W1Q8NGF6 305 aa15.25■□□□□ 0.03
MSLN-207ENST00000566549 NEIL1Q96FI4 390 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms