RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 OR4P4Q8NGL7 312 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 YPEL2Q96QA6 119 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 OR2V2Q96R30 315 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 SRRM5B3KS81 715 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 MYOD1P15172 320 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 LOXL3P58215 753 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 EFNB3Q15768 340 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 ARSJQ5FYB0 599 aaPredicted RBP11.75□□□□□ -0.53
CDH1-209ENST00000566510 TEPPQ6URK8 271 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 GCSAMQ8N6F7 178 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 NDUFAF3Q9BU61 184 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 IGHG3P01860 377 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 GCHFRP30047 84 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 TIMP3P35625 211 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 TAS2R60P59551 318 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 MBNL2Q5VZF2 373 aaKnown RBP11.75□□□□□ -0.53
CDH1-209ENST00000566510 OR4S2Q8NH73 311 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 MS4A10Q96PG2 267 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 CALYQ9NYX4 217 aa11.75□□□□□ -0.53
CDH1-209ENST00000566510 FAM90A9PA6NNJ1 464 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 ZNF705FA8MVS1 300 aaPredicted RBP11.74□□□□□ -0.53
CDH1-209ENST00000566510 PRSS46E5RG02 174 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 ZNF705DP0CH99 300 aaPredicted RBP11.74□□□□□ -0.53
CDH1-209ENST00000566510 ZNF705BP0CI00 300 aaPredicted RBP11.74□□□□□ -0.53
CDH1-209ENST00000566510 CD33P20138 364 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 CBLN1P23435 193 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 NPY1RP25929 384 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 SSTP61278 116 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 MSMPQ1L6U9 139 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 HLA-DRB5Q30154 266 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 FAM90A1Q86YD7 464 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 LYG1Q8N1E2 194 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 SLC24A4Q8NFF2 622 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 OR52E5Q8NH55 327 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 PROCRQ9UNN8 238 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 TP53TG5Q9Y2B4 290 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 M0R1B8 84 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 GNG10P50151 68 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 RHOBP62745 196 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 RAB31Q13636 194 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 TMEM249Q2WGJ8 235 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 TEX38Q6PEX7 206 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 BHLHA15Q7RTS1 189 aaPredicted RBP11.74□□□□□ -0.53
CDH1-209ENST00000566510 C1orf162Q8NEQ5 155 aaPredicted RBP11.74□□□□□ -0.53
CDH1-209ENST00000566510 DEFB108BQ8NET1 73 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 SARAFQ96BY9 339 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 FAM122AQ96E09 287 aa11.74□□□□□ -0.53
CDH1-209ENST00000566510 CA2P00918 260 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 PAX1P15863 534 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 AARDQ4LEZ3 155 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 LRFN3Q9BTN0 628 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 ROS1P08922 2347 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 ARFGEF3Q5TH69 2177 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 SAA2-SAA4A0A096LPE2 208 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 PRR33A8MZF0 331 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 CGAP01215 116 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 IGLV1-44P01699 117 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 SAA2P0DJI9 122 aaPredicted RBP11.73□□□□□ -0.53
CDH1-209ENST00000566510 IGFBP2P18065 325 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 CT45A1Q5HYN5 189 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 TGIF2LXQ8IUE1 241 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 CT45A3Q8NHU0 189 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 TUBG2Q9NRH3 451 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 C15orf61A6NNL5 157 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 K7EN84 100 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 MT-CO2P00403 227 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 TMPRSS3P57727 454 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 ERVFC1-1P60608 527 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 OR5I1Q13606 314 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 PLA2G2CQ5R387 149 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 ZNF71Q9NQZ8 489 aaPredicted RBP11.73□□□□□ -0.53
CDH1-209ENST00000566510 PLSCR4Q9NRQ2 329 aa11.73□□□□□ -0.53
CDH1-209ENST00000566510 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
CDH1-209ENST00000566510 SPINK4O60575 86 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 DUX4L9Q6RFH8 374 aaPredicted RBP11.72□□□□□ -0.53
CDH1-209ENST00000566510 ITLN1Q8WWA0 313 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 STARD4Q96DR4 205 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 UHRF2Q96PU4 802 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 NAGKQ9UJ70 344 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 A8MXE2 369 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 F2RL2O00254 374 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 KIR2DS2P43631 304 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
CDH1-209ENST00000566510 FAM216AQ8WUB2 273 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 CBLN4Q9NTU7 201 aa11.72□□□□□ -0.53
CDH1-209ENST00000566510 TNFSF13O75888 250 aa11.71□□□□□ -0.53
CDH1-209ENST00000566510 IER3P46695 156 aa11.71□□□□□ -0.53
CDH1-209ENST00000566510 RAB7AP51149 207 aa11.71□□□□□ -0.53
CDH1-209ENST00000566510 MRPS11P82912 194 aaKnown RBP11.71□□□□□ -0.53
CDH1-209ENST00000566510 PSG5Q15238 335 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms