RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 LIPFP07098 398 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 VDAC2P45880 294 aaPredicted RBP13.63□□□□□ -0.23
RAB40C-210ENST00000566290 EFNA4P52798 201 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 ERVFRD-1P60508 538 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 SERF2P84101 59 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 CLINT1Q14677 625 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 CLEC12BQ2HXU8 276 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 LRRC75BQ2VPJ9 315 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 OR4A47Q6IF82 309 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 HAPLN4Q86UW8 402 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 CCDC28AQ8IWP9 274 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 OR2G3Q8NGZ4 309 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 VSTM2AQ8TAG5 236 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 CLCC1Q96S66 551 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 NABP2Q9BQ15 211 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 PLA2G2EQ9NZK7 142 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 AMMECR1Q9Y4X0 333 aaPredicted RBP13.63□□□□□ -0.23
RAB40C-210ENST00000566290 A0A1B0GW64 132 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 A0A1W2PPE3 182 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 FBXO24O75426 580 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 IAPPP10997 89 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 PRRX1P54821 245 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 LINC00205P59089 165 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 HSPE1P61604 102 aaKnown RBP13.62□□□□□ -0.23
RAB40C-210ENST00000566290 KRTAP1-1Q07627 177 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 Q6ZRG5 221 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 MAPK1IP1LQ8NDC0 245 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 OR13D1Q8NGV5 346 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 OR10X1Q8NGY0 326 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 OR5B3Q8NH48 314 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 OR4C12Q96R67 309 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 TMEM147Q9BVK8 224 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 CLEC7AQ9BXN2 247 aa13.62□□□□□ -0.23
RAB40C-210ENST00000566290 QTRT1Q9BXR0 403 aaKnown RBP13.62□□□□□ -0.23
RAB40C-210ENST00000566290 UNKLQ9H9P5 680 aaKnown RBP13.62□□□□□ -0.23
RAB40C-210ENST00000566290 IGHV2-26A0A0B4J1V2 119 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 PPIAL4CA0A0B4J2A2 164 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 FNDC10F2Z333 226 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 LYNX1G3V0Z9 82 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 UPK2O00526 184 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 METTL15P1P0C7V9 234 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 PPIAL4GP0DN37 164 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 LYNX1P0DP58 116 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 MDKP21741 143 aaPredicted RBP13.61□□□□□ -0.23
RAB40C-210ENST00000566290 SLC38A11Q08AI6 406 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 HLA-DRB5Q30154 266 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 SPANXN5Q5MJ07 72 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 ABHD12Q8N2K0 398 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 HSD17B11Q8NBQ5 300 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 OR4C13Q8NGP0 309 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 MRPL20Q9BYC9 149 aaKnown RBP13.61□□□□□ -0.23
RAB40C-210ENST00000566290 WDR61Q9GZS3 305 aaKnown RBP13.61□□□□□ -0.23
RAB40C-210ENST00000566290 SMDT1Q9H4I9 107 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 TCF19Q9Y242 345 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 WASHC3Q9Y3C0 194 aa13.61□□□□□ -0.23
RAB40C-210ENST00000566290 TRAV1-1A0A0B4J248 108 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 CEBPZOSA8MTT3 80 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 RNF223E7ERA6 249 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 H3BP45 60 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 NXPH3O95157 252 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 ARL16Q0P5N6 197 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 TMEM267Q0VDI3 215 aaPredicted RBP13.6□□□□□ -0.23
RAB40C-210ENST00000566290 TGIF2LXQ8IUE1 241 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 LILRB2Q8N423 598 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 TMEM217Q8N7C4 229 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 OR10P1Q8NGE3 313 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 NUP50Q9UKX7 468 aa13.6□□□□□ -0.23
RAB40C-210ENST00000566290 IGHV4-30-2A0A087WSY4 118 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 C15orf62A8K5M9 175 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 MPDU1O75352 247 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 RBMXL2O75526 392 aaKnown RBP13.59□□□□□ -0.23
RAB40C-210ENST00000566290 IGHV3-7P01780 117 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 USF1P22415 310 aaPredicted RBP13.59□□□□□ -0.23
RAB40C-210ENST00000566290 GPR6P46095 362 aaPredicted RBP13.59□□□□□ -0.23
RAB40C-210ENST00000566290 LGALS7P47929 136 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 CAMLGP49069 296 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 PRCDQ00LT1 54 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 OR11H6Q8NGC7 330 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 TMEM167AQ8TBQ9 72 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 SCGB1C1Q8TD33 95 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 RNF5Q99942 180 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 SH3BGRL3Q9H299 93 aa13.59□□□□□ -0.23
RAB40C-210ENST00000566290 PRSS46E5RG02 174 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 HAX1O00165 279 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 KBTBD11O94819 623 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 IFNA17P01571 189 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 DLK1P80370 383 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 BSXQ3C1V8 233 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 C10orf91Q5T1B1 145 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 AVPI1Q5T686 147 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 TAF15Q92804 592 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAB40C-210ENST00000566290 LHX4Q969G2 390 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 FLYWCH2Q96CP2 140 aaKnown RBP13.58□□□□□ -0.24
RAB40C-210ENST00000566290 SSBP3Q9BWW4 388 aaPredicted RBP13.58□□□□□ -0.24
RAB40C-210ENST00000566290 UQCC1Q9NVA1 299 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 ABCA1O95477 2261 aa13.58□□□□□ -0.24
RAB40C-210ENST00000566290 A0A096LNT2 108 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 C22orf46C9J442 243 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 LY6LH3BQJ8 138 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 HBE1P02100 147 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms