RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 PRNDQ9UKY0 176 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 FBXO7Q9Y3I1 522 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 TNCP24821 2201 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 CRYM-AS1A6NIL9 109 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 ADARB2-AS1A8MUL3 147 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 NUDT19A8MXV4 375 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 OR9G9P0C7N8 305 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 IL7P13232 177 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 UCP1P25874 307 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 G6PCP35575 357 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 SSBP2P81877 361 aaPredicted RBP9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 RBMS2Q15434 407 aaKnown RBP9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 TRIM16LQ309B1 348 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 FAM219AQ8IW50 185 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 TTC9CQ8N5M4 171 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 OR1L8Q8NGR8 309 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 OR4A16Q8NH70 328 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 MYOZ3Q8TDC0 251 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 RRNAD1Q96FB5 475 aaKnown RBP9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 GALNT14Q96FL9 552 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 USMG5Q96IX5 58 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 SDHCQ99643 169 aaPredicted RBP9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 FAM103A1Q9BTL3 118 aaKnown RBP9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 TMEM222Q9H0R3 208 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 NAA60Q9H7X0 242 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 ZNF355PQ9NSJ1 428 aa9.84□□□□□ -0.83
SHCBP1-204ENST00000565887 CDS2O95674 445 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 RPLP1P05386 114 aaKnown RBP9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 MYCNOSP40205 109 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 UBE2MP61081 183 aaKnown RBP9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 SRPXP78539 464 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 RUNX1Q01196 453 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 ZNF846Q147U1 533 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 TMEM128Q5BJH2 165 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 FAM209BQ5JX69 171 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 ZNF491Q8N8L2 437 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 OR5T1Q8NG75 326 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 OR5B3Q8NH48 314 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 FAM110DQ8TAY7 271 aaPredicted RBP9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 IL22RA2Q969J5 263 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 TMEM56Q96MV1 263 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 TP53RKQ96S44 253 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 ZNF257Q9Y2Q1 563 aa9.83□□□□□ -0.84
SHCBP1-204ENST00000565887 A0A1W2PRX2 142 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 NPIPB5A8MRT5 1133 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 PF4P02776 101 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 TRAPPC2P0DI81 140 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 TRAPPC2BP0DI82 140 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 HIST1H1BP16401 226 aaKnown RBP9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 AKR1C4P17516 323 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 OR2B8PP59922 312 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 KLHL30-AS1Q8NEE0 82 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 GLYATL2Q8WU03 294 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 C4orf3Q8WVX3 66 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 RBPMSQ93062 196 aaKnown RBP9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 FYTTD1Q96QD9 318 aaKnown RBP9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 QTRT1Q9BXR0 403 aaKnown RBP9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 KLK15Q9H2R5 256 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 OR51B2Q9Y5P1 312 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 TMEM56-RWDD3S4R434 201 aa9.82□□□□□ -0.84
SHCBP1-204ENST00000565887 C13orf42A0A1B0GVH6 325 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 FAM223BA6NKX1 122 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 SOX15O60248 233 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 IGKV1-39P01597 117 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 TRGV3P03979 118 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 IGKV1D-39P04432 117 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 CRYGCP07315 174 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 OR5AC1P0C628 307 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 AKR1C2P52895 323 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 TPPP2P59282 170 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 KIAA0141Q14154 515 aaPredicted RBP9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 SP6Q3SY56 376 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 ZNF429Q86V71 674 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 FAM223AQ8IWN6 122 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 ADAD2Q8NCV1 583 aaKnown RBP9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 WFDC9Q8NEX5 89 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 RNASE11Q8TAA1 199 aaKnown RBP9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 TMEM14BQ9NUH8 114 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 COA4Q9NYJ1 87 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 THYN1Q9P016 225 aa9.81□□□□□ -0.84
SHCBP1-204ENST00000565887 DNHD1Q96M86 4753 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 TEX50A0A1B0GTY4 177 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 TEX22C9J3V5 150 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 CCL24O00175 119 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 RBMXL2O75526 392 aaKnown RBP9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 NDUFB6O95139 128 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 TSPAN15O95858 294 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 PSMB6P28072 239 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 RAB25P57735 213 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 KLK9Q2XQG4 91 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 ASPHD1Q5U4P2 390 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 MZT2BQ6NZ67 158 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 TMED4Q7Z7H5 227 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 LGI3Q8N145 548 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 CENPSQ8N2Z9 138 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 NECAP1Q8NC96 275 aa9.8□□□□□ -0.84
SHCBP1-204ENST00000565887 LSM10Q969L4 123 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms