RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 RBMY1BA6NDE4 496 aaKnown RBP17.88■□□□□ 0.45
RAB40C-209ENST00000565511 RBMY1EA6NEQ0 496 aaKnown RBP17.88■□□□□ 0.45
RAB40C-209ENST00000565511 GGCTO75223 188 aaKnown RBP17.88■□□□□ 0.45
RAB40C-209ENST00000565511 RBMY1DP0C7P1 496 aaKnown RBP17.88■□□□□ 0.45
RAB40C-209ENST00000565511 KIR2DS2P43631 304 aa17.88■□□□□ 0.45
RAB40C-209ENST00000565511 OR2B8PP59922 312 aa17.88■□□□□ 0.45
RAB40C-209ENST00000565511 KCTD12Q96CX2 325 aaKnown RBP17.88■□□□□ 0.45
RAB40C-209ENST00000565511 ZC4H2Q9NQZ6 224 aa17.88■□□□□ 0.45
RAB40C-209ENST00000565511 A0A0A6YYH2 397 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 LCE6AA0A183 80 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 IGLC7A0M8Q6 106 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 TMEM213A2RRL7 107 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 A6NJ64 397 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 HRASP01112 189 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 ARL3P36405 182 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 TMEM17Q86X19 198 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 HIPK2Q9H2X6 1198 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 CEPT1Q9Y6K0 416 aa17.87■□□□□ 0.45
RAB40C-209ENST00000565511 PLECQ15149 4684 aaKnown RBP17.86■□□□□ 0.45
RAB40C-209ENST00000565511 LGALS9O00182 355 aa17.86■□□□□ 0.45
RAB40C-209ENST00000565511 S1PR2O95136 353 aa17.86■□□□□ 0.45
RAB40C-209ENST00000565511 RPA2P15927 270 aa17.86■□□□□ 0.45
RAB40C-209ENST00000565511 KCTD21Q4G0X4 260 aa17.86■□□□□ 0.45
RAB40C-209ENST00000565511 OR51H1Q8NH63 302 aa17.86■□□□□ 0.45
RAB40C-209ENST00000565511 HRASLSQ9HDD0 168 aa17.86■□□□□ 0.45
RAB40C-209ENST00000565511 EPPK1P58107 5090 aaKnown RBP17.86■□□□□ 0.45
RAB40C-209ENST00000565511 HYDINQ4G0P3 5121 aa17.86■□□□□ 0.45
RAB40C-209ENST00000565511 UPK2O00526 184 aa17.85■□□□□ 0.45
RAB40C-209ENST00000565511 RBFOX2O43251 390 aaKnown RBP eCLIP17.85■□□□□ 0.452e-11■■□□□ 12.3
RAB40C-209ENST00000565511 POU2AF1Q16633 256 aa17.85■□□□□ 0.45
RAB40C-209ENST00000565511 GPHB5Q86YW7 130 aa17.85■□□□□ 0.45
RAB40C-209ENST00000565511 OR5AP2Q8NGF4 316 aa17.85■□□□□ 0.45
RAB40C-209ENST00000565511 MLXQ9UH92 298 aa17.85■□□□□ 0.45
RAB40C-209ENST00000565511 ANAPC10Q9UM13 185 aa17.85■□□□□ 0.45
RAB40C-209ENST00000565511 GUCA2BQ16661 112 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 UNQ9165/PRO28630Q6UXU0 137 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 LAX1Q8IWV1 398 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 TMEM61Q8N0U2 210 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 ZBTB34Q8NCN2 500 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 OR10W1Q8NGF6 305 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 OR4A5Q8NH83 315 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 GIMAP1Q8WWP7 306 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 EEF1AKMT3Q96AZ1 226 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 SRD5A3Q9H8P0 318 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 DIABLOQ9NR28 239 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 TMEM140Q9NV12 185 aa17.84■□□□□ 0.45
RAB40C-209ENST00000565511 TPPPO94811 219 aa17.83■□□□□ 0.44
RAB40C-209ENST00000565511 CBLN1P23435 193 aa17.83■□□□□ 0.44
RAB40C-209ENST00000565511 GNRHRP30968 328 aa17.83■□□□□ 0.44
RAB40C-209ENST00000565511 RPS19P39019 145 aaKnown RBP17.83■□□□□ 0.44
RAB40C-209ENST00000565511 TAS2R31P59538 309 aa17.83■□□□□ 0.44
RAB40C-209ENST00000565511 A8MWP6 167 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 XRCC3O43542 346 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 HPRT1P00492 218 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 RFX2P48378 723 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 LSM3P62310 102 aaKnown RBP17.82■□□□□ 0.44
RAB40C-209ENST00000565511 CATR1Q13166 79 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 TM4SF20Q53R12 229 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 FAM209BQ5JX69 171 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 AADACL3Q5VUY0 350 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 ZNF502Q8TBZ5 544 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 YIPF6Q96EC8 236 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 FXYD6Q9H0Q3 95 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 SLC2A8Q9NY64 477 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 EHFQ9NZC4 300 aa17.82■□□□□ 0.44
RAB40C-209ENST00000565511 ALMS1Q8TCU4 4167 aa17.81■□□□□ 0.44
RAB40C-209ENST00000565511 IGHV3-35A0A0C4DH35 117 aa17.81■□□□□ 0.44
RAB40C-209ENST00000565511 OR11H12B2RN74 326 aa17.81■□□□□ 0.44
RAB40C-209ENST00000565511 NQO2P16083 231 aa17.81■□□□□ 0.44
RAB40C-209ENST00000565511 HIST1H1BP16401 226 aaKnown RBP17.81■□□□□ 0.44
RAB40C-209ENST00000565511 CBX5P45973 191 aa17.81■□□□□ 0.44
RAB40C-209ENST00000565511 TAS2R20P59543 309 aa17.81■□□□□ 0.44
RAB40C-209ENST00000565511 TECRQ9NZ01 308 aaKnown RBP17.81■□□□□ 0.44
RAB40C-209ENST00000565511 ZNF320A2RRD8 509 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 PMP2P02689 132 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 RLN1P04808 185 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 CLEC3BP05452 202 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 DEFA4P12838 97 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 GPR183P32249 361 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 MFAP2P55001 183 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 UBE2NLQ5JXB2 153 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 UXS1Q8NBZ7 420 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 PLEKHA2Q9HB19 425 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 IFT46Q9NQC8 304 aa17.8■□□□□ 0.44
RAB40C-209ENST00000565511 DHFRP00374 187 aa17.79■□□□□ 0.44
RAB40C-209ENST00000565511 IFNA6P05013 189 aa17.79■□□□□ 0.44
RAB40C-209ENST00000565511 HERV-K104P61576 105 aa17.79■□□□□ 0.44
RAB40C-209ENST00000565511 WT1-ASQ06250 92 aa17.79■□□□□ 0.44
RAB40C-209ENST00000565511 BTNL8Q6UX41 500 aa17.79■□□□□ 0.44
RAB40C-209ENST00000565511 SAMD12Q8N8I0 201 aa17.79■□□□□ 0.44
RAB40C-209ENST00000565511 MOB3AQ96BX8 217 aa17.79■□□□□ 0.44
RAB40C-209ENST00000565511 ZNF2Q9BSG1 426 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-209ENST00000565511 PGLYRP1O75594 196 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-209ENST00000565511 SCAF4O95104 1147 aaKnown RBP17.78■□□□□ 0.44
RAB40C-209ENST00000565511 ZNF57Q68EA5 555 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-209ENST00000565511 DHRS11Q6UWP2 260 aa17.78■□□□□ 0.44
RAB40C-209ENST00000565511 DMBX1Q8NFW5 382 aa17.78■□□□□ 0.44
RAB40C-209ENST00000565511 QTRT1Q9BXR0 403 aaKnown RBP17.78■□□□□ 0.44
RAB40C-209ENST00000565511 COMMD9Q9P000 198 aa17.78■□□□□ 0.44
RAB40C-209ENST00000565511 NSG2Q9Y328 171 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms