RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 SDF2L1Q9HCN8 221 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 TCF19Q9Y242 345 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 YBX2Q9Y2T7 364 aaKnown RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 PLXNA2O75051 1894 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 TRAV21A0A0B4J279 112 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 BGLAPP02818 100 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 GCHFRP30047 84 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 LINC01555Q8NAE3 123 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.37□□□□□ -1.71
SMG1-211ENST00000565324 MEX3AA1L020 520 aaKnown RBP4.37□□□□□ -1.71
SMG1-211ENST00000565324 LEPP41159 167 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 RND2P52198 227 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 CD200R1LQ6Q8B3 271 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 PRR13Q9NZ81 148 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 HYAL3O43820 417 aaPredicted RBP4.37□□□□□ -1.71
SMG1-211ENST00000565324 KIAA1644Q3SXP7 199 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 PEX7O00628 323 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 EFNB2P52799 333 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 CCL7P80098 99 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 RHOGP84095 191 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 RNASEH2CQ8TDP1 164 aaKnown RBP4.37□□□□□ -1.71
SMG1-211ENST00000565324 RASL10BQ96S79 203 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 LY75O60449 1722 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 TRBV5-3A0A0A0MS03 114 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 ZIC1Q15915 447 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 ASCL2Q99929 193 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 IGHV4-39P01824 125 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 APELAP0DMC3 54 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 IFI27P40305 119 aaPredicted RBP4.37□□□□□ -1.71
SMG1-211ENST00000565324 DTX2Q86UW9 622 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 LURAP1LQ8IV03 231 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 TDHQ8IZJ6 230 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 CALYQ9NYX4 217 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 LRP5O75197 1615 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 TRBV23-1A0A0A0MS06 115 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 M0R2P5 195 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 FER1L6-AS1Q8NA97 138 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 FBLIM1Q8WUP2 373 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 APOBEC4Q8WW27 367 aaKnown RBP4.37□□□□□ -1.71
SMG1-211ENST00000565324 LOXL4Q96JB6 756 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 GDF15Q99988 308 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 CGB1A6NKQ9 187 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 SHISA8B8ZZ34 492 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 J3QW42 95 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 UCP2P55851 309 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 PCSK4Q6UW60 755 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 C1QL4Q86Z23 238 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 CCL4L1Q8NHW4 92 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 PRDM14Q9GZV8 571 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 OSTCQ9NRP0 149 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 PLA2G3Q9NZ20 509 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 C1QL1O75973 258 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 OR4D11Q8NGI4 311 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 WNT10AQ9GZT5 417 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 C5orf66Q9H5L9 145 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 TRAV8-1A0A0A6YYK1 113 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 KLK10O43240 276 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 SPINT1O43278 529 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 NBEAP1P0C6P0 100 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 CTGFP29279 349 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 P2RY4P51582 365 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 LINC00305Q7Z4B0 112 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 NRN1Q9NPD7 142 aa4.37□□□□□ -1.71
SMG1-211ENST00000565324 SPTBN2O15020 2390 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 DXOO77932 396 aaKnown RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 HOXD3P31249 432 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 C8orf82Q6P1X6 216 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 CACNG8Q8WXS5 425 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 CXCL16Q9H2A7 254 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HS3ST3B1Q9Y662 390 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 FOXI3A8MTJ6 420 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 C9orf172C9J069 976 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 C16orf97H3BN30 126 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 UNC119Q13432 240 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 PMVKQ15126 192 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 INAFM2P0DMQ5 153 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 PF4V1P10720 104 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 CBLN3Q6UW01 205 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 TMEM171Q8WVE6 324 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 DUX5Q96PT3 197 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 TMEM74BQ9NUR3 256 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 SPTA1P02549 2419 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 NRXN3Q9Y4C0 1643 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 FAM90A27PA6NNH2 459 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 GPR6P46095 362 aaPredicted RBP4.36□□□□□ -1.71
SMG1-211ENST00000565324 STARD6P59095 220 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 IFITM2Q01629 132 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 TMEM186Q96B77 213 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 SEMA5BQ9P283 1151 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 LOC105371267A0A1B0GV96 52 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 DRAM1Q8N682 238 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 ERG28Q9UKR5 140 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 KLF12Q9Y4X4 402 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 COX11Q9Y6N1 276 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 THADAQ6YHU6 1953 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 TRAV12-3A0A0B4J271 114 aa4.36□□□□□ -1.71
SMG1-211ENST00000565324 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms