RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 OR4P4Q8NGL7 312 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 OR5AK3PQ8NH89 298 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 ZNRF2Q8NHG8 242 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 CCL4L1Q8NHW4 92 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 JOSD2Q8TAC2 188 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 NAT14Q8WUY8 206 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 HIST1H2BAQ96A08 127 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 EBNA1BP2Q99848 306 aaKnown RBP1.29□□□□□ -2.2
PALB2-203ENST00000565038 ZNF251Q9BRH9 671 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 DCUN1D5Q9BTE7 237 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 TMEM208Q9BTX3 173 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 TTTY12Q9BZ98 90 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 ARL6Q9H0F7 186 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 SLC23A2Q9UGH3 650 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 STOML2Q9UJZ1 356 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 DNAJC12Q9UKB3 198 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 SCML1Q9UN30 329 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 COQ4Q9Y3A0 265 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 PHLDA3Q9Y5J5 127 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 PCYT1BQ9Y5K3 369 aaPredicted RBP1.29□□□□□ -2.2
PALB2-203ENST00000565038 U3KQA8 63 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 AHCTF1Q8WYP5 2266 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 MYH9P35579 1960 aaKnown RBP1.28□□□□□ -2.2
PALB2-203ENST00000565038 MYO18AQ92614 2054 aaKnown RBP1.28□□□□□ -2.2
PALB2-203ENST00000565038 FAM208BQ5VWN6 2430 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 MAST4O15021 2626 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 DAPL1A0PJW8 107 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 C17orf98A8MV24 154 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 MKRN2OSH3BPM6 223 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 M0QYV0 167 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 IGLV3-27P01718 113 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 TPM3P06753 285 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 CCL4P13236 92 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 ORM2P19652 201 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 GADD45AP24522 165 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 CD40LGP29965 261 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 SNRPFP62306 86 aaKnown RBP1.28□□□□□ -2.2
PALB2-203ENST00000565038 TPM4P67936 248 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 CCL7P80098 99 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 SLAMF1Q13291 335 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 MAPK14Q16539 360 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 DEFB133Q30KQ1 61 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 TMEM176BQ3YBM2 270 aaPredicted RBP1.28□□□□□ -2.2
PALB2-203ENST00000565038 DNAL1Q4LDG9 190 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 FAM162BQ5T6X4 162 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 HES3Q5TGS1 186 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 PDPK2PQ6A1A2 396 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 MUC15Q8N387 334 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 OR9I1Q8NGQ6 314 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 KCTD4Q8WVF5 259 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 PATE1Q8WXA2 126 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 RORBQ92753 470 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 PRSS27Q9BQR3 290 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 METTL9Q9H1A3 318 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 MRPL40Q9NQ50 206 aaKnown RBP1.28□□□□□ -2.2
PALB2-203ENST00000565038 NUP205Q92621 2012 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 ACACAQ13085 2346 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 PTPRQQ9UMZ3 2332 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 NBASA2RRP1 2371 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 SPTAN1Q13813 2472 aaKnown RBP1.28□□□□□ -2.2
PALB2-203ENST00000565038 NAV2Q8IVL1 2488 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 CENPEQ02224 2701 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 UBR5O95071 2799 aaPredicted RBP1.28□□□□□ -2.2
PALB2-203ENST00000565038 ATMQ13315 3056 aa1.28□□□□□ -2.2
PALB2-203ENST00000565038 VPS13CQ709C8 3753 aa1.28□□□□□ -2.21
PALB2-203ENST00000565038 TEX15Q9BXT5 2789 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 USP9XQ93008 2570 aaPredicted RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 RALGAPA2Q2PPJ7 1873 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 CMYA5Q8N3K9 4069 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 GOLGA8RI6L899 631 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 KPNA3O00505 521 aaPredicted RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 PHYHO14832 338 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 LECT2O14960 151 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 UGT2B11O75310 529 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 S1PR2O95136 353 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 EPPINO95925 133 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 PAEPP09466 180 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 FBP1P09467 338 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 OCMP0CE72 109 aaPredicted RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 CRABP1P29762 137 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 PPP1CCP36873 323 aaKnown RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 UBE2G2P60604 165 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 ACTBP60709 375 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 ACTG1P63261 375 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 SMAGPQ0VAQ4 97 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 C1DQ13901 141 aaKnown RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 PAFAH1B3Q15102 231 aaKnown RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 CENPWQ5EE01 88 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 C10orf91Q5T1B1 145 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 C2orf73Q8N5S3 287 aaPredicted RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 KRTCAP2Q8N6L1 136 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 OR7G1Q8NGA0 311 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 GALMQ96C23 342 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 CMBLQ96DG6 245 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 SMIM12Q96EX1 92 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 ZNF514Q96K75 400 aaPredicted RBP1.27□□□□□ -2.21
PALB2-203ENST00000565038 GPR22Q99680 433 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 MED18Q9BUE0 208 aa1.27□□□□□ -2.21
PALB2-203ENST00000565038 TRIM4Q9C037 500 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms