RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 S1PR2O95136 353 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 RIPPLY2Q5TAB7 128 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 WFDC8Q8IUA0 241 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 IGHV2-26A0A0B4J1V2 119 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 SPATA46Q5T0L3 261 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 TCTEX1D1Q8N7M0 179 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 SSMEM1Q8WWF3 244 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 SFXN3Q9BWM7 321 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 HSPB7Q9UBY9 170 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 BMPR1BO00238 502 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 NGFP01138 241 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 PPBPP02775 128 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 RAC1P63000 192 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 RPEL1Q2QD12 228 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 MKXQ8IYA7 352 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 DLL3Q9NYJ7 618 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 MED12LQ86YW9 2145 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 C5orf49A4QMS7 147 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 DEGS1O15121 323 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 PLGLB1Q02325 96 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 STUMQ69YW2 141 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 AMMECR1LQ6DCA0 310 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 OR4A47Q6IF82 309 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 GCNT2Q8N0V5 402 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 Q8NFD4 153 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 CSTL1Q9H114 145 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 RPH3ALQ9UNE2 315 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 V9GYV3 84 aa13.55□□□□□ -0.24
LINC00554-201ENST00000564841 ZNF891A8MT65 544 aaPredicted RBP13.54□□□□□ -0.24
LINC00554-201ENST00000564841 CELA3BP08861 270 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 RPL19P84098 196 aaKnown RBP13.54□□□□□ -0.24
LINC00554-201ENST00000564841 MORN2Q502X0 79 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 C5orf30Q96GV9 206 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 OR2D2Q9H210 308 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 ZNF503-AS2A6NEH8 195 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 LRRC30A6NM36 301 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 MAGEA5P43359 124 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 OR1C1Q15619 314 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 EBLN2Q6P2I7 272 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 TMEM136Q6ZRR5 245 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 FAM58AQ8N1B3 248 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 KLHDC1Q8N7A1 406 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 BCL2L2Q92843 193 aaPredicted RBP13.54□□□□□ -0.24
LINC00554-201ENST00000564841 BORCS7Q96B45 105 aa13.54□□□□□ -0.24
LINC00554-201ENST00000564841 LIN7CQ9NUP9 197 aaKnown RBP13.54□□□□□ -0.24
LINC00554-201ENST00000564841 C17orf98A8MV24 154 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 TMEM238C9JI98 176 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 SAP30O75446 220 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 SH2D2AQ9NP31 389 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 MRPS16Q9Y3D3 137 aaKnown RBP13.53□□□□□ -0.24
LINC00554-201ENST00000564841 A0A1W2PN81 502 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 MMP23AO75900 390 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 BRWD1-AS2P59051 145 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 TNXAQ16473 311 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 PRRG4Q9BZD6 226 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 SEPSECSQ9HD40 501 aaKnown RBP13.53□□□□□ -0.24
LINC00554-201ENST00000564841 TRAPPC2LQ9UL33 140 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 WASHC3Q9Y3C0 194 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 APC2O95996 2303 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 SRD5A2P31213 254 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 PMCHL1Q16048 86 aa13.53□□□□□ -0.24
LINC00554-201ENST00000564841 EAF1Q96JC9 268 aaPredicted RBP13.53□□□□□ -0.24
LINC00554-201ENST00000564841 MCRIP2Q9BUT9 160 aaKnown RBP13.53□□□□□ -0.24
LINC00554-201ENST00000564841 TRAV30A0A087WSZ9 112 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 IGHV1-69-2A0A0G2JMI3 117 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 SH2D7A6NKC9 451 aaPredicted RBP13.52□□□□□ -0.24
LINC00554-201ENST00000564841 NEURL1O76050 574 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 CYC1P08574 325 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 GATA2P23769 480 aaPredicted RBP13.52□□□□□ -0.24
LINC00554-201ENST00000564841 B3GALT5-AS1P59052 145 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 GGNQ86UU5 652 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 KCNE4Q8WWG9 221 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 NUDT11Q96G61 164 aa13.52□□□□□ -0.24
LINC00554-201ENST00000564841 ZNF716A6NP11 495 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.52□□□□□ -0.25
LINC00554-201ENST00000564841 TAX1BP3O14907 124 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 CD1BP29016 333 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 SELENOVP59797 346 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 SLAQ13239 276 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 NHLRC2Q8NBF2 726 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 DEFB127Q9H1M4 99 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 CLEC5AQ9NY25 188 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 ICE1Q9Y2F5 2266 aa13.52□□□□□ -0.25
LINC00554-201ENST00000564841 ATMQ13315 3056 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 OR5B21A6NL26 309 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 GPR6P46095 362 aaPredicted RBP13.51□□□□□ -0.25
LINC00554-201ENST00000564841 SRSF7Q16629 238 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00554-201ENST00000564841 GNB1LQ9BYB4 327 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 SPRY4Q9C004 299 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 C15orf62A8K5M9 175 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 C17orf112F2Z3M2 114 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 VAMP5O95183 116 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 GOSR1O95249 250 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 NUDT3O95989 172 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 RAC3P60763 192 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 PQLC2Q6ZP29 291 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 MUC15Q8N387 334 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 PLPPR2Q96GM1 343 aa13.51□□□□□ -0.25
LINC00554-201ENST00000564841 SSBP3Q9BWW4 388 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms