RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 SAA2-SAA4A0A096LPE2 208 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 A0A1W2PPV4 95 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 TYMSP04818 313 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 STAG3L2P0CL84 134 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 STAG3L3P0CL85 134 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 SAA2P0DJI9 122 aaPredicted RBP12.54□□□□□ -0.4
HERC2-207ENST00000564734 FABP4P15090 132 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 MIC13Q5XKP0 118 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 STUMQ69YW2 141 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 VHLLQ6RSH7 139 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 TMEM14BQ9NUH8 114 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 PXMP4Q9Y6I8 212 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 INTS1Q8N201 2190 aaKnown RBP12.54□□□□□ -0.4
HERC2-207ENST00000564734 C1orf185Q5T7R7 199 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 TMEM183AQ8IXX5 376 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 GCM1Q9NP62 436 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 EPG5Q9HCE0 2579 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 ATMQ13315 3056 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 TRBV23-1A0A0A0MS06 115 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 IL6RP08887 468 aaPredicted RBP12.53□□□□□ -0.4
HERC2-207ENST00000564734 UBE2G2P60604 165 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 ARSJQ5FYB0 599 aaPredicted RBP12.53□□□□□ -0.4
HERC2-207ENST00000564734 Q6ZS92 163 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 GAFA1Q96PS6 74 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 RNF7Q9UBF6 113 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 ZMAT5Q9UDW3 170 aaKnown RBP12.53□□□□□ -0.4
HERC2-207ENST00000564734 RAXQ9Y2V3 346 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 F6UZH7 168 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
HERC2-207ENST00000564734 TIMP3P35625 211 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 THBS3P49746 956 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 OR4A47Q6IF82 309 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
HERC2-207ENST00000564734 ZNF729A6NN14 1252 aaPredicted RBP12.52□□□□□ -0.4
HERC2-207ENST00000564734 PPP5D1E7EU14 171 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 IGHV1-46P01743 117 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 CD99P14209 185 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.4
HERC2-207ENST00000564734 HSPE1P61604 102 aaKnown RBP12.52□□□□□ -0.4
HERC2-207ENST00000564734 POU2AF1Q16633 256 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 ACTL10Q5JWF8 245 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 FAM209BQ5JX69 171 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 DERL1Q9BUN8 251 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 NPVFQ9HCQ7 196 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 RAB9BQ9NP90 201 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.4
HERC2-207ENST00000564734 NDUFB4O95168 129 aa12.52□□□□□ -0.41
HERC2-207ENST00000564734 ARL14EPLP0DKL9 152 aa12.52□□□□□ -0.41
HERC2-207ENST00000564734 RHOVQ96L33 236 aa12.52□□□□□ -0.41
HERC2-207ENST00000564734 TXNDC17Q9BRA2 123 aa12.52□□□□□ -0.41
HERC2-207ENST00000564734 IDI2-AS1Q9NZ38 188 aa12.52□□□□□ -0.41
HERC2-207ENST00000564734 IL19Q9UHD0 177 aa12.52□□□□□ -0.41
HERC2-207ENST00000564734 ZFYVE26Q68DK2 2539 aa12.52□□□□□ -0.41
HERC2-207ENST00000564734 TET2Q6N021 2002 aaPredicted RBP12.52□□□□□ -0.41
HERC2-207ENST00000564734 COL6A6A6NMZ7 2263 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 CXorf1O96002 111 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 BMP5P22003 454 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 CLEC12BQ2HXU8 276 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 PACRGQ96M98 296 aaPredicted RBP12.51□□□□□ -0.41
HERC2-207ENST00000564734 HCFC1P51610 2035 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 A0A1W2PPQ1 181 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 C1QTNF9P0C862 333 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
HERC2-207ENST00000564734 PDLIM4P50479 330 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 MRPS11P82912 194 aaKnown RBP12.51□□□□□ -0.41
HERC2-207ENST00000564734 CST9LP1Q5W188 147 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 ZNF114Q8NC26 417 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 OR1P1Q8NH06 330 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 ZCCHC14Q8WYQ9 949 aaKnown RBP12.51□□□□□ -0.41
HERC2-207ENST00000564734 CORO2AQ92828 525 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
HERC2-207ENST00000564734 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
HERC2-207ENST00000564734 ZNF788Q6ZQV5 615 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 TMEM144Q7Z5S9 345 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 CISD2Q8N5K1 135 aaKnown RBP12.5□□□□□ -0.41
HERC2-207ENST00000564734 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
HERC2-207ENST00000564734 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 TRBV20OR9-2A0A075B6H5 130 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 MMP23AO75900 390 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 CA2P00918 260 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 NPY1RP25929 384 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 CHRNA7P36544 502 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 IMMP2LQ96T52 175 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 SFXN3Q9BWM7 321 aa12.5□□□□□ -0.41
HERC2-207ENST00000564734 HEATR1Q9H583 2144 aaKnown RBP12.49□□□□□ -0.41
HERC2-207ENST00000564734 AMBPP02760 352 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 MYOD1P15172 320 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 LCN2P80188 198 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 LYG1Q8N1E2 194 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
HERC2-207ENST00000564734 SSMEM1Q8WWF3 244 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 PFDN5Q99471 154 aa12.49□□□□□ -0.41
HERC2-207ENST00000564734 RPL29P47914 159 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms