RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 C10orf55Q5SWW7 151 aa10.57□□□□□ -0.72
CNOT1-206ENST00000564557 TTC9CQ8N5M4 171 aa10.57□□□□□ -0.72
CNOT1-206ENST00000564557 ADAD2Q8NCV1 583 aaKnown RBP10.57□□□□□ -0.72
CNOT1-206ENST00000564557 MIXL1Q9H2W2 232 aa10.57□□□□□ -0.72
CNOT1-206ENST00000564557 TNCP24821 2201 aa10.57□□□□□ -0.72
CNOT1-206ENST00000564557 HMX3A6NHT5 357 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 SAP30O75446 220 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 SNAPC5O75971 98 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 RAB3DO95716 219 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 CD3DP04234 171 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 DEFA4P12838 97 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 RPA2P15927 270 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 RHOGP84095 191 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 SSBP1Q04837 148 aaKnown RBP10.56□□□□□ -0.72
CNOT1-206ENST00000564557 EGFEM1PQ0D2K5 195 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 TATDN3Q17R31 274 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 SCGB2B2Q4G0G5 96 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 ZNF429Q86V71 674 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 ARRDC1Q8N5I2 433 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 MCFD2Q8NI22 146 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 RSRP1Q9BUV0 290 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 ELOVL1Q9BW60 279 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 SLC2A9Q9NRM0 540 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 TMEM140Q9NV12 185 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 ZNF257Q9Y2Q1 563 aa10.56□□□□□ -0.72
CNOT1-206ENST00000564557 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 UPK2O00526 184 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 KRASP01116 189 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 PRH1P02810 166 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 ECI1P42126 302 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 DCTN2Q13561 401 aaKnown RBP10.55□□□□□ -0.72
CNOT1-206ENST00000564557 POU2AF1Q16633 256 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 STEAP1BQ6NZ63 245 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 TBC1D26Q86UD7 250 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 ZFAND1Q8TCF1 268 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 DLX4Q92988 240 aaPredicted RBP10.55□□□□□ -0.72
CNOT1-206ENST00000564557 OR4C12Q96R67 309 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 PEF1Q9UBV8 284 aaKnown RBP10.55□□□□□ -0.72
CNOT1-206ENST00000564557 RSL24D1Q9UHA3 163 aaKnown RBP10.55□□□□□ -0.72
CNOT1-206ENST00000564557 MEGF8Q7Z7M0 2845 aa10.55□□□□□ -0.72
CNOT1-206ENST00000564557 FABP12A6NFH5 140 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 NPIPB5A8MRT5 1133 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 DISC1C4P0D8 188 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 CYB5BO43169 146 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 OR2J3O76001 311 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 LY86O95711 162 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 SERPINE2P07093 398 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 IL6RP08887 468 aaPredicted RBP10.54□□□□□ -0.72
CNOT1-206ENST00000564557 ZNF735P0CB33 412 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 HIST1H1BP16401 226 aaKnown RBP10.54□□□□□ -0.72
CNOT1-206ENST00000564557 S100A5P33763 92 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 DEFA5Q01523 94 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 MEF2DQ14814 521 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 RPEL1Q2QD12 228 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 FAM209BQ5JX69 171 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 NECAP1Q8NC96 275 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
CNOT1-206ENST00000564557 TSC22D3Q99576 134 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 AKIP1Q9NQ31 210 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 COPZ2Q9P299 210 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 CEPT1Q9Y6K0 416 aa10.54□□□□□ -0.72
CNOT1-206ENST00000564557 TEX22C9J3V5 150 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 CTDSPLO15194 276 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 PSMB6P28072 239 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 G6PCP35575 357 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 PPP5CP53041 499 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 EXOSC2Q13868 293 aaKnown RBP10.53□□□□□ -0.72
CNOT1-206ENST00000564557 THOC7Q6I9Y2 204 aaKnown RBP10.53□□□□□ -0.72
CNOT1-206ENST00000564557 ZNF343Q6P1L6 599 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 CCDC71LQ8N9Z2 235 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 TERB2Q8NHR7 220 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 SMIM4Q8WVI0 70 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 HINT2Q9BX68 163 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 SLIRPQ9GZT3 109 aaKnown RBP10.53□□□□□ -0.72
CNOT1-206ENST00000564557 FAM212BQ9NTI7 297 aaPredicted RBP10.53□□□□□ -0.72
CNOT1-206ENST00000564557 FKBP11Q9NYL4 201 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 FBXL7Q9UJT9 491 aa10.53□□□□□ -0.72
CNOT1-206ENST00000564557 TRAV3A0A0B4J244 114 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 WI2-2373I1.2A0A1W2PRP0 233 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 E7EUB6 86 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 K7EIL1 84 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 RBMXL2O75526 392 aaKnown RBP10.52□□□□□ -0.73
CNOT1-206ENST00000564557 ATG12O94817 140 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 CD74P04233 296 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 REG1AP05451 166 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 FGF2P09038 288 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 AKAIN1P0CW23 69 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 TRAPPC2P0DI81 140 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 TRAPPC2BP0DI82 140 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 MYOD1P15172 320 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 TNFSF8P32971 234 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 PIGPP57054 158 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 OR2B8PP59922 312 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 C15orf32Q32M92 178 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 H2BFWTQ7Z2G1 175 aa10.52□□□□□ -0.73
CNOT1-206ENST00000564557 HSD17B13Q7Z5P4 300 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms