RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 PPP5CP53041 499 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 OR51S1Q8NGJ8 323 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 CASTOR1Q8WTX7 329 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 SEC22AQ96IW7 307 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 NOTCH3Q9UM47 2321 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 H0Y980 276 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 B3GALNT1O75752 331 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 KRASP01116 189 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 CRYGCP07315 174 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 RPA2P15927 270 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 OR2B8PP59922 312 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 GDPD1Q8N9F7 314 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 DMBX1Q8NFW5 382 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
USB1-209ENST00000564387 PHB2Q99623 299 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 C5orf66Q9H5L9 145 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 HRASLSQ9HDD0 168 aa13.4□□□□□ -0.26
USB1-209ENST00000564387 NPIPB5A8MRT5 1133 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 TRGV3P03979 118 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
USB1-209ENST00000564387 CD33P20138 364 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 G6PCP35575 357 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 TPPP2P59282 170 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 AP3S2P59780 193 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 ERVK-16P61578 105 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 DEFB136Q30KP8 78 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 MS4A10Q96PG2 267 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 DUX3Q96PT4 197 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 TP53RKQ96S44 253 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 SDHCQ99643 169 aaPredicted RBP13.39□□□□□ -0.27
USB1-209ENST00000564387 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
USB1-209ENST00000564387 SCP2D1Q9UJQ7 156 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 ZNF257Q9Y2Q1 563 aa13.39□□□□□ -0.27
USB1-209ENST00000564387 A0A0G2JLM5 398 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 C3orf85A0A1B0GTC6 90 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 HMX3A6NHT5 357 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 G3V4G9 280 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 RBMXL2O75526 392 aaKnown RBP13.38□□□□□ -0.27
USB1-209ENST00000564387 DUS4LO95620 317 aaKnown RBP13.38□□□□□ -0.27
USB1-209ENST00000564387 P0C879 139 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 APELAP0DMC3 54 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 MYOD1P15172 320 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 UCP1P25874 307 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 BEAN1Q3B7T3 259 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 LINC00299Q6ZSB3 139 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 SLC25A42Q86VD7 318 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 TOMM5Q8N4H5 51 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 OR11H1Q8NG94 326 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 TMEM14BQ9NUH8 114 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 COPZ2Q9P299 210 aa13.38□□□□□ -0.27
USB1-209ENST00000564387 WIPF1O43516 503 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 SERPINE2P07093 398 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 CTRB1P17538 263 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 FAUP35544 74 aaKnown RBP13.37□□□□□ -0.27
USB1-209ENST00000564387 ZNF45Q02386 682 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 ZNF616Q08AN1 781 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 CTRB2Q6GPI1 263 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 THOC7Q6I9Y2 204 aaKnown RBP13.37□□□□□ -0.27
USB1-209ENST00000564387 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 COMMD5Q9GZQ3 224 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 NDUFA4L2Q9NRX3 87 aa13.37□□□□□ -0.27
USB1-209ENST00000564387 TEX50A0A1B0GTY4 177 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 IGLC7A0M8Q6 106 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 OR8U8P0C7N1 319 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 AREGP15514 252 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 IGLL1P15814 213 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 PSMB6P28072 239 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 BAK1Q16611 211 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 ZNF343Q6P1L6 599 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 GLYATL2Q8WU03 294 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 SCGB3A2Q96PL1 93 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 FYTTD1Q96QD9 318 aaKnown RBP13.36□□□□□ -0.27
USB1-209ENST00000564387 TSC22D3Q99576 134 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 ALX4Q9H161 411 aaPredicted RBP13.36□□□□□ -0.27
USB1-209ENST00000564387 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 COA4Q9NYJ1 87 aa13.36□□□□□ -0.27
USB1-209ENST00000564387 C14orf166Q9Y224 244 aaKnown RBP13.36□□□□□ -0.27
USB1-209ENST00000564387 CRYM-AS1A6NIL9 109 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 FAM223BA6NKX1 122 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 CDS2O95674 445 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 IGKV1-5P01602 117 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 HSPB1P04792 205 aaKnown RBP13.35□□□□□ -0.27
USB1-209ENST00000564387 HSD17B13Q7Z5P4 300 aaPredicted RBP13.35□□□□□ -0.27
USB1-209ENST00000564387 FAM223AQ8IWN6 122 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 OR1L8Q8NGR8 309 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 TMEM230Q96A57 120 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 FANCD2OSQ96PS1 177 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 OR5B12Q96R08 314 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 MCRIP2Q9BUT9 160 aaKnown RBP13.35□□□□□ -0.27
USB1-209ENST00000564387 QTRT1Q9BXR0 403 aaKnown RBP13.35□□□□□ -0.27
USB1-209ENST00000564387 TMEM222Q9H0R3 208 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 AKIP1Q9NQ31 210 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms