RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 APOC1P02654 83 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 ORM2P19652 201 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 ALOX5APP20292 161 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 RPL5P46777 297 aaKnown RBP1.36□□□□□ -2.19
CHD9-209ENST00000564255 SULT1A1P50225 295 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 SNAP25P60880 206 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 VIRMAQ69YN4 1812 aaKnown RBP1.36□□□□□ -2.19
CHD9-209ENST00000564255 C5orf46Q6UWT4 87 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 IDO2Q6ZQW0 420 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 LRRC25Q8N386 305 aaPredicted RBP1.36□□□□□ -2.19
CHD9-209ENST00000564255 SFRP2Q96HF1 295 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 ABCA3Q99758 1704 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 C1QTNF6Q9BXI9 259 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 MED28Q9H204 178 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 GLTPQ9NZD2 209 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 VPREB3Q9UKI3 123 aa1.36□□□□□ -2.19
CHD9-209ENST00000564255 FAM32AQ9Y421 112 aaKnown RBP1.36□□□□□ -2.19
CHD9-209ENST00000564255 CCDC144AA2RUR9 1427 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 HAND1O96004 215 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 IGLV3-19P01714 112 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 IGHMP01871 453 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 IGHV3-30-3P0DP02 117 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 RPS12P25398 132 aaKnown RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 DDTP30046 118 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 SRP9P49458 86 aaKnown RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 PPP1R1AQ13522 171 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OR2F1Q13607 317 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 AMMECR1LQ6DCA0 310 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 C16orf78Q8WTQ4 265 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 EEF1AKMT1Q8WVE0 214 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 ABHD14BQ96IU4 210 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 TSC22D3Q99576 134 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 PHB2Q99623 299 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 MED18Q9BUE0 208 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OR52A1Q9UKL2 312 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 TMEM56-RWDD3S4R434 201 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 COL24A1Q17RW2 1714 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 EIF2AK4Q9P2K8 1649 aaKnown RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 PRXQ9BXM0 1461 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 NUP205Q92621 2012 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OR6C6A6NF89 314 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 RFPL4AA6NLU0 287 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 LINC00587B1AMM8 73 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 RFPL4AL1F8VTS6 287 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 TSTD3H0UI37 97 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 KPNA4O00629 521 aaPredicted RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 CPSF4O95639 269 aaKnown RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 RNASE2P10153 161 aaKnown RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 RPL12P30050 165 aaKnown RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 GABRA3P34903 492 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 FABP5Q01469 135 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 BSPH1Q075Z2 132 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OR8G1Q15617 311 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 HIST3H3Q16695 136 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 TMEM97Q5BJF2 176 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 C3orf62Q6ZUJ4 267 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 LYPD6Q86Y78 171 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 LYPD1Q8N2G4 141 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 ZNF676Q8N7Q3 588 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OR10K1Q8NGX5 313 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OR10A6Q8NH74 314 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 RNASE11Q8TAA1 199 aaKnown RBP1.35□□□□□ -2.19
CHD9-209ENST00000564255 AIF1LQ9BQI0 150 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 UPK3BQ9BT76 320 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 MIXL1Q9H2W2 232 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 DUSP21Q9H596 190 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 HDGFL3Q9Y3E1 203 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 ALG5Q9Y673 324 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 PXDNQ92626 1479 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OVOS2A0A0G2JMS6 1433 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OVOS2A0A0J9YW53 1432 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 OVOS2Q6IE36 1432 aa1.35□□□□□ -2.19
CHD9-209ENST00000564255 TRAV8-1A0A0A6YYK1 113 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 CLDN24A6NM45 220 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 ZNF878C9JN71 531 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 F8W036 122 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 MRASO14807 208 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 CST8O60676 142 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 OR10J1P30954 320 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 CDC42P60953 191 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 HERVK_113P63121 156 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 EDDM3AQ14507 147 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 STX19Q8N4C7 294 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 EIF4E3Q8N5X7 224 aaKnown RBP1.34□□□□□ -2.19
CHD9-209ENST00000564255 UBL4BQ8N7F7 174 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 LHFPL5Q8TAF8 219 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 C11orf40Q8WZ69 217 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 HIST1H2BAQ96A08 127 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 IMP4Q96G21 291 aaKnown RBP1.34□□□□□ -2.19
CHD9-209ENST00000564255 PECRQ9BY49 303 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 HES4Q9HCC6 221 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 GSKIPQ9P0R6 139 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 VPS29Q9UBQ0 182 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 DNAJC12Q9UKB3 198 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 ARHGEF5Q12774 1597 aa1.34□□□□□ -2.19
CHD9-209ENST00000564255 DICER1Q9UPY3 1922 aaKnown RBP1.34□□□□□ -2.2
CHD9-209ENST00000564255 GGTLC3B5MD39 225 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 D6RAR5 112 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 CHP2O43745 196 aa1.34□□□□□ -2.2
CHD9-209ENST00000564255 SLC25A20O43772 301 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms