RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 NPIPB5A8MRT5 1133 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 NOL3O60936 208 aaKnown RBP23.58■■□□□ 1.37
CMTM4-204ENST00000563952 IFNA6P05013 189 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 S100GP29377 79 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 DCTN2Q13561 401 aaKnown RBP23.58■■□□□ 1.37
CMTM4-204ENST00000563952 NECAP1Q8NC96 275 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 C15orf40Q8WUR7 153 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 FCAMRQ8WWV6 532 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 BCL7BQ9BQE9 202 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 RSRP1Q9BUV0 290 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 ELOVL1Q9BW60 279 aa23.58■■□□□ 1.37
CMTM4-204ENST00000563952 TPPPO94811 219 aa23.57■■□□□ 1.36
CMTM4-204ENST00000563952 REG1AP05451 166 aa23.57■■□□□ 1.36
CMTM4-204ENST00000563952 RNASE10Q5GAN6 216 aaKnown RBP23.57■■□□□ 1.36
CMTM4-204ENST00000563952 DYNC2LI1Q8TCX1 351 aa23.57■■□□□ 1.36
CMTM4-204ENST00000563952 COMMD5Q9GZQ3 224 aa23.57■■□□□ 1.36
CMTM4-204ENST00000563952 MTFP1Q9UDX5 166 aa23.57■■□□□ 1.36
CMTM4-204ENST00000563952 CGB1A6NKQ9 187 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 MARCH11A6NNE9 402 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 CD3DP04234 171 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 PSMB6P28072 239 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 SYNJ2BPP57105 145 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 OR2B8PP59922 312 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 KLF5Q13887 457 aaPredicted RBP23.56■■□□□ 1.36
CMTM4-204ENST00000563952 C15orf32Q32M92 178 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 SLC38A6Q8IZM9 456 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 CCDC59Q9P031 241 aaKnown RBP23.56■■□□□ 1.36
CMTM4-204ENST00000563952 FBXL7Q9UJT9 491 aa23.56■■□□□ 1.36
CMTM4-204ENST00000563952 KRASP01116 189 aa23.55■■□□□ 1.36
CMTM4-204ENST00000563952 RPEL1Q2QD12 228 aa23.55■■□□□ 1.36
CMTM4-204ENST00000563952 ZNF585BQ52M93 769 aa23.55■■□□□ 1.36
CMTM4-204ENST00000563952 TBC1D26Q86UD7 250 aa23.55■■□□□ 1.36
CMTM4-204ENST00000563952 DHFRP00374 187 aa23.54■■□□□ 1.36
CMTM4-204ENST00000563952 G6PCP35575 357 aa23.54■■□□□ 1.36
CMTM4-204ENST00000563952 UCP3P55916 312 aa23.54■■□□□ 1.36
CMTM4-204ENST00000563952 CD69Q07108 199 aa23.54■■□□□ 1.36
CMTM4-204ENST00000563952 HAPLN4Q86UW8 402 aa23.54■■□□□ 1.36
CMTM4-204ENST00000563952 OR6Q1Q8NGQ2 317 aa23.54■■□□□ 1.36
CMTM4-204ENST00000563952 CRYGCP07315 174 aa23.53■■□□□ 1.36
CMTM4-204ENST00000563952 DEFA4P12838 97 aa23.53■■□□□ 1.36
CMTM4-204ENST00000563952 PGAM2P15259 253 aa23.53■■□□□ 1.36
CMTM4-204ENST00000563952 SPNP16150 400 aa23.53■■□□□ 1.36
CMTM4-204ENST00000563952 LSM4Q9Y4Z0 139 aaKnown RBP23.53■■□□□ 1.36
CMTM4-204ENST00000563952 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP23.52■■□□□ 1.36
CMTM4-204ENST00000563952 H3BMQ9 156 aa23.52■■□□□ 1.36
CMTM4-204ENST00000563952 CTRB1P17538 263 aa23.52■■□□□ 1.36
CMTM4-204ENST00000563952 CTRB2Q6GPI1 263 aa23.52■■□□□ 1.36
CMTM4-204ENST00000563952 OR9G4Q8NGQ1 327 aa23.52■■□□□ 1.36
CMTM4-204ENST00000563952 ISOC1Q96CN7 298 aa23.52■■□□□ 1.36
CMTM4-204ENST00000563952 DIRAS2Q96HU8 199 aa23.52■■□□□ 1.36
CMTM4-204ENST00000563952 C6orf62Q9GZU0 229 aaPredicted RBP23.52■■□□□ 1.36
CMTM4-204ENST00000563952 GABARAPH6UMI1 98 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 BMPR1BO00238 502 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 NDUFB8O95169 186 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 TBPP20226 339 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 TATDN3Q17R31 274 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 ARRDC1Q8N5I2 433 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 TMEM229BQ8NBD8 167 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 FANCD2OSQ96PS1 177 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 B9D2Q9BPU9 175 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 QTRT1Q9BXR0 403 aaKnown RBP23.51■■□□□ 1.35
CMTM4-204ENST00000563952 NSG2Q9Y328 171 aa23.51■■□□□ 1.35
CMTM4-204ENST00000563952 IGLC7A0M8Q6 106 aa23.5■■□□□ 1.35
CMTM4-204ENST00000563952 IGHV3-23P01764 117 aa23.5■■□□□ 1.35
CMTM4-204ENST00000563952 TAS2R19P59542 299 aa23.5■■□□□ 1.35
CMTM4-204ENST00000563952 OR4D10Q8NGI6 311 aa23.5■■□□□ 1.35
CMTM4-204ENST00000563952 S4R3C0 116 aa23.5■■□□□ 1.35
CMTM4-204ENST00000563952 TEX50A0A1B0GTY4 177 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 SNAPC5O75971 98 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 FGF2P09038 288 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 HIST1H1BP16401 226 aaKnown RBP23.49■■□□□ 1.35
CMTM4-204ENST00000563952 PI3P19957 117 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 PPP5CP53041 499 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 MRPS10P82664 201 aaKnown RBP23.49■■□□□ 1.35
CMTM4-204ENST00000563952 IL18Q14116 193 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 LHFPL1Q86WI0 220 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 OR10W1Q8NGF6 305 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 HINT2Q9BX68 163 aa23.49■■□□□ 1.35
CMTM4-204ENST00000563952 PPP5D1E7EU14 171 aa23.48■■□□□ 1.35
CMTM4-204ENST00000563952 RAB3DO95716 219 aa23.48■■□□□ 1.35
CMTM4-204ENST00000563952 TRAPPC2P0DI81 140 aa23.48■■□□□ 1.35
CMTM4-204ENST00000563952 TRAPPC2BP0DI82 140 aa23.48■■□□□ 1.35
CMTM4-204ENST00000563952 SCGB2B2Q4G0G5 96 aa23.48■■□□□ 1.35
CMTM4-204ENST00000563952 SRSF8Q9BRL6 282 aaKnown RBP23.48■■□□□ 1.35
CMTM4-204ENST00000563952 OR51B2Q9Y5P1 312 aa23.48■■□□□ 1.35
CMTM4-204ENST00000563952 SORL1Q92673 2214 aa23.48■■□□□ 1.35
CMTM4-204ENST00000563952 CD74P04233 296 aa23.47■■□□□ 1.35
CMTM4-204ENST00000563952 GP9P14770 177 aa23.47■■□□□ 1.35
CMTM4-204ENST00000563952 STEAP1BQ6NZ63 245 aa23.47■■□□□ 1.35
CMTM4-204ENST00000563952 IL34Q6ZMJ4 242 aa23.47■■□□□ 1.35
CMTM4-204ENST00000563952 OR1L8Q8NGR8 309 aa23.47■■□□□ 1.35
CMTM4-204ENST00000563952 FAM212BQ9NTI7 297 aaPredicted RBP23.47■■□□□ 1.35
CMTM4-204ENST00000563952 IGLV11-55A0A075B6I3 123 aa23.46■■□□□ 1.35
CMTM4-204ENST00000563952 IGLV1-51P01701 117 aa23.46■■□□□ 1.35
CMTM4-204ENST00000563952 FAM209BQ5JX69 171 aa23.46■■□□□ 1.35
CMTM4-204ENST00000563952 SMIM4Q8WVI0 70 aa23.46■■□□□ 1.35
CMTM4-204ENST00000563952 EEF1AKMT3Q96AZ1 226 aa23.46■■□□□ 1.35
CMTM4-204ENST00000563952 ZNF486Q96H40 463 aaPredicted RBP23.46■■□□□ 1.35
CMTM4-204ENST00000563952 SLIRPQ9GZT3 109 aaKnown RBP23.46■■□□□ 1.35
CMTM4-204ENST00000563952 OR13C7P0DN81 318 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms